Phyre 2 alignment of P75823 with d1b5pa

Job Description P75823
Confidence 99.97% Date Thu Jan 5 12:14:38 GMT 2012

Rank 29 Aligned Residues 324

% Identity 15% Template d1b5pa_

SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like

Resolution 1.80

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure											.														.																								.	.	.	.	.	.	.	.
Query SS confidence											.														.																								.	.	.	.	.	.	.	.
Query Sequence	M	I	D	L	R	S	D	T	V	T	.	R	P	S	R	A	M	L	E	A	M	M	A	A	.	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	.	.	.	.	.	.	.	.	S	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C
Query Conservation											.														.																								.	.	.	.	.	.	.	.
Alig confidence											.														.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	L	V	A	L	T	A	G	E	P	D	F	D	T	P	E	H	V	K	E	A	A	R	R	A	L	A	Q	G	K	T	K	Y	A	P	P	A	G	I	P	E	L	R	E	A	L	A	E	K	F	R	R	E	N	G	L	S	V	T	P	E	E	T	I	V	T	V	G	G	S	Q	A	L	F	N	L	F	Q	A	I	L
Template Known Secondary structure							S	S		S	S																T	T			S				T	T																T	T						G	G	G					S
Template Predicted Secondary structure
Template SS confidence
	33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

	71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence	E	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K
Query Conservation
Alig confidence																	.	.	.																										.	.
Template Conservation																	.	.	.																										.	.
Template Sequence	D	P	G	D	E	V	I	V	L	S	P	Y	W	V	S	Y	.	.	.	P	E	M	V	R	F	A	G	G	V	V	V	E	V	E	T	L	P	E	E	G	F	V	P	D	.	.	P	E	R	V	R	R	A	I	T	P	R	T	K	A	L	V	V	N	S	P	N	N	P	T	G	A	V	Y	P	K	E	V	L	E
Template Known Secondary structure		T	T								S			T			.	.	.							T	T										G	G	G	T	T				.	.						T	T			T	T								S	S		T	T	T
Template Predicted Secondary structure																	.	.	.																										.	.
Template SS confidence
	113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

	151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	.	.	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G	G	G	M
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence	A	L	A	R	L	A	V	E	H	D	F	Y	L	V	S	D	E	I	Y	E	H	L	L	Y	E	G	E	H	F	S	P	G	R	V	A	P	E	H	T	L	T	V	N	G	A	A	K	A	F	A	M	T	G	W	R	I	G	Y	A	C	G	P	K	E	V	I	K	A	M	A	S	V	S	R	Q	S	T	T	S	P
Template Known Secondary structure									T	T								T	T	T	T		B	S	S	S					G	G	G	T		T	T	T							S	T	T	T	T	T		G	G	G																					T	T	T		S
Template Predicted Secondary structure
Template SS confidence
	188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

	229	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure															.	.	.	.	.																																	.										.	.
Query SS confidence															.	.	.	.	.																																	.										.	.
Query Sequence	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	.	.	.	.	.	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	.	T	N	M	L	F	V	R	V	G	.	.	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L
Query Conservation															.	.	.	.	.																																	.										.	.
Alig confidence															.	.	.	.	.																																	.										.	.
Template Conservation
Template Sequence	D	T	I	A	Q	W	A	T	L	E	A	L	T	N	Q	E	A	S	R	A	F	V	E	M	A	R	E	A	Y	R	R	R	R	D	L	L	L	E	G	L	T	A	L	G	L	K	A	V	R	P	S	G	A	F	Y	V	L	M	D	T	S	P	I	A	P	D	E	V	R	A	A	E	R	L	L	E	A	G	V	A
Template Known Secondary structure																																												T			B				S	B	T	T							T	T	T		S	S											T	T
Template Predicted Secondary structure
Template SS confidence
	268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

	301	.	.	.							.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence	I	N	A	S	.	.	.	.	.	.	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.									.	.
Template Conservation																			.	.
Template Sequence	V	V	P	G	T	D	F	A	A	F	G	H	V	R	L	S	Y	A	.	.	T	S	E	E	N	L	R	K	A	L	E	R	F	A	R	V	L
Template Known Secondary structure				S	G	G	G	T		T	T								.	.	S												G	G	G	G
Template Predicted Secondary structure																			.	.
Template SS confidence
	348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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