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Job DescriptionP75823
Confidence99.91%DateThu Jan 5 12:14:38 GMT 2012
Rank215Aligned Residues304
% Identity10%Templatec3qm2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50. ........60.........70......
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Query Sequence  MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEA. . . . AIFLPTGTQANLVALLSHCERGEEY
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Template Sequence  VFNFSSGPAMLP. AEVLKLAQQEV. . . . . . . . . . . AEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTA
Template Known Secondary structure 


SSS



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TT
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   4.....10..... ....20...... ...30.........40.........50.........60.........70.
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  IVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFT
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Template Sequence  DYVDAGYWAASAIKEAKKYCAPQIIDAKITVDGKRAVKPMREWQLS. . . DNAAYLHYCPNETIDGIAIDETP. . . . . . . D
Template Known Secondary structure  SSTTTS
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   95....100.........110.........120.........130.........140 .........150.........160... .
 
   157..160.........170.........180.........190.........200.........210....... ..220........
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Query Sequence  RERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRA. . . . . . . . IRWRKMTGGGM
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Template Sequence  FGPEVVVTADFSSTILSAPLDV. . . . . . . SRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNPTF
Template Known Secondary structure 

TT


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G.......GG
STTTTT

TTGGG
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   165....170.........180...... ...190.........200.........210.........220.........230.......
 
   229230.........240.... .....250.........260.........270..... ....280...... ...290.........300.
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Query Sequence  RQSGILAAAGIYALKN. NVARLQEDHDNAAWMAEQLREAGADVMRQDT. . . . . NMLFVRVGEEN. AAALGEYMKARNVLI
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Template Sequence  AWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLDKVFLEESFAAGLHA
Template Known Secondary structure  TT
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B
GGGB
SSSSGGGTT
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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   302.. .....310.........320.........330...
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Query Sequence  NAS. . . . PIVRLVTHLDVSREQLAEVAAHWRAFLAR
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Template Sequence  LKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERR
Template Known Secondary structure 
B

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   325....330.........340.........350.........360
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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