Job Description P75823 Confidence 99.93% Date Thu Jan 5 12:14:38 GMT 2012 Rank 181 Aligned Residues 333 % Identity 15% Template c3n5mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure														.	.	.	.																				.	.	.																					.																					.
Query SS confidence														.	.	.	.																				.	.	.																					.																					.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	.	.	.	.	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	.	.	.	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	.	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	.
Query Conservation														.	.	.	.																				.	.	.																					.																					.
Alig confidence														.	.	.	.																				.	.	.																					.																					.
Template Conservation
Template Sequence		Y	L	D	G	X	S	G	L	W	C	V	N	S	G	Y	G	R	K	E	L	A	E	A	A	Y	K	Q	L	Q	T	L	S	Y	F	P	X	S	Q	S	H	E	P	A	I	K	L	A	E	K	L	N	E	W	L	G	G	E	Y	V	I	F	F	S	N	S	G	S	E	A	N	E	T	A	F	K	I	A	R	Q	Y
Template Known Secondary structure					T	T					T		T	T		B														T	T		S				T	T	S																	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
										72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.													.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	.	.	.	.	.	.	.	.	.	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	.	.	.	.	.	.	.	.	.	.	.	.	L	D	K	V	A	M	K	I	K	P
Query Conservation		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	Q	K	G	E	P	H	R	Y	K	F	X	S	R	Y	R	G	Y	H	G	N	T	X	A	T	X	A	A	T	G	Q	A	Q	R	R	Y	Q	Y	E	P	F	A	S	G	F	L	H	V	T	P	P	D	C	Y	R	X	P	G	I	E	R	E	N	I	Y	D	V	E	C	V	K	E	V	D	R	V	X	T	W
Template Known Secondary structure				T	T	T		T	T								T	T					S	S						S				G	G	G	T	T	T	T					S										T	T	T	S	T	T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	.	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		E	L	S	E	T	I	A	A	F	I	X	E	P	I	I	T	G	G	G	I	L	X	A	P	Q	D	Y	X	K	A	V	H	E	T	C	Q	K	H	G	A	L	L	I	S	D	E	V	I	C	G	F	G	R	T	G	K	A	F	G	F	X	N	Y	D	V	K	P	D	I	I	T	X	A	K	G	I	T	S	A	Y
Template Known Secondary structure				G	G	G								S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T				S						G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270
Predicted Secondary structure																				.	.	.	.	.	.																																													.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.																																													.	.	.	.	.
Query Sequence		P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	.	.	.	.	.	.	W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	.	.	.	.	.	R	E	A	G	A	D	V
Query Conservation																				.	.	.	.	.	.																																													.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation
Template Sequence		L	P	L	S	A	T	A	V	K	R	E	I	Y	E	A	F	K	G	K	G	E	Y	E	F	F	R	H	I	N	T	F	G	G	N	P	A	A	C	A	L	A	L	K	N	L	E	I	I	E	N	E	N	L	I	E	R	S	A	Q	X	G	S	L	L	L	E	Q	L	K	E	E	I	G	E	H	P	L	V	G	D
Template Known Secondary structure		S													G	G	G		S	S	S	T	T		S						S	S	S	S																		T	T																					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.											.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.									.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		M	R	Q	D	T	N	M	L	F	V	R	V	.	.	.	.	.	.	.	.	.	.	G	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	S	P	.	.	.	.	.	.	.	.	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A
Query Conservation														.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	G	K	G	L	L	V	G	I	E	L	V	N	D	K	E	T	K	E	P	I	D	N	D	K	I	A	S	V	V	N	A	C	K	E	K	G	L	I	I	G	R	N	G	X	T	T	A	G	Y	N	N	I	L	T	L	A	P	P	L	V	I	S	S	E	E	I	A	F	V	I	G	T	L	K	T	A	X	E
Template Known Secondary structure					S	S	S										T	T	T	T																		T	T							T	T	S	S	T	T											T	T																		T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		333
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		448

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions