Job Description P75823 Confidence 99.93% Date Thu Jan 5 12:14:38 GMT 2012 Rank 190 Aligned Residues 315 % Identity 17% Template c3mc6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of scdpl1 Resolution 3.15 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																													.	.	.	.	.	.																	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.																	.	.	.	.																						.	.	.	.	.	.
Query Sequence		T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	.	.	.	.	.	.	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	.	.	.	.	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.																	.	.	.	.																						.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	G	D	D	L	I	H	L	Q	T	I	A	Y	E	K	Y	C	V	A	N	Q	L	H	P	D	V	F	P	A	V	R	K	M	E	S	E	V	V	S	M	V	L	R	M	F	N	A	P	S	D	T	G	C	G	T	T	T	S	G	G	T	E	S	L	L	L	A	C	L	S	A	K	M	Y	A	L	H	H	R
Template Known Secondary structure																		T	S	S		B	T	T		T	T	T																			T	T			T	T	T							S	S																				S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
				72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																							.
Query SS confidence		.	.																																							.
Query Sequence		.	.	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	.	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y
Query Conservation		.	.																																							.
Alig confidence		.	.																.	.	.																					.															.	.	.	.																			.	.	.
Template Conservation																			.	.	.																																				.	.	.	.																			.	.	.
Template Sequence		G	I	T	E	P	E	I	I	A	P	V	T	A	H	A	G	F	.	.	.	D	K	A	A	Y	Y	F	G	M	K	L	R	H	V	E	L	D	P	T	T	Y	Q	V	D	L	G	K	V	K	K	F	I	N	K	N	.	.	.	.	T	V	L	L	V	G	S	A	P	N	F	P	H	G	I	A	D	D	.	.	.
Template Known Secondary structure				S	S							T	T	S					.	.	.							S									B		T	T	T		S	B		T	T	T	T	G	G	G			S	S	.	.	.	.								T	T		T	T	T					S	.	.	.
Template Predicted Secondary structure																			.	.	.																																				.	.	.	.																			.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	.	.	.	.	.	.	.	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	G	L	G	K	I	A	Q	K	Y	K	L	P	L	H	V	D	S	C	L	G	S	F	I	V	S	F	M	E	K	A	G	Y	K	N	L	P	L	L	D	F	R	V	P	G	V	T	S	I	S	C	D	T	H	K	Y	G	F	A	P	K	G	S	S	V	I	M	Y	R	N	S	D	L	R	M	H	Q	Y	Y
Template Known Secondary structure			T	T	T	T	T					T	T							T	T	T	T					G	G	G	T	T	T	T			S					S	T	T	S	T	T								T	T	T	T	T				S	S							S	S					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		222	.	.	.																.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.						.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.						.
Query Sequence		K	M	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	.	.	G	A	D	V	M	.	R	Q	D	T	N	M	L	F	V	R	V	G
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.						.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.						.
Template Conservation
Template Sequence		V	N	P	A	W	T	G	G	L	Y	G	S	P	T	L	A	G	S	R	P	G	A	I	V	V	G	C	W	A	T	M	V	N	M	G	E	N	G	Y	I	E	S	C	Q	E	I	V	G	A	A	M	K	F	K	K	Y	I	Q	E	N	I	P	D	L	D	I	M	G	N	P	R	Y	S	V	I	S	F	S	S	K
Template Known Secondary structure			B	T	T		T	T	S		B			S	S	S		S	S		B																																								S		T	T					S				S	S							T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	.	.	.	S	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation																						.	.	.
Alig confidence																						.	.	.														.
Template Conservation																																						.
Template Sequence		T	L	N	I	H	E	L	S	D	R	L	S	K	K	G	W	H	F	N	A	L	Q	K	P	V	A	L	H	M	A	F	T	R	L	S	A	.	H	V	V	D	E	I	C	D	I	L	R	T	T	V	Q	E
Template Known Secondary structure		T	T	T										T	T	T		B						S	S									T	T	T	T	.		T
Template Predicted Secondary structure																																						.
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions