Job Description P75823 Confidence 99.93% Date Thu Jan 5 12:14:38 GMT 2012 Rank 184 Aligned Residues 322 % Identity 14% Template c3k7yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: aspartate aminotransferase of plasmodium falciparum Resolution 2.80 Å

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		1	.	.	.	.	.	.	.							.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.											.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure										.	.	.	.	.	.																	.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																	.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	D	L	R	S	D	T	.	.	.	.	.	.	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	.	.	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	.	.	.	.	.	.	.	.	.	.	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N
Query Conservation										.	.	.	.	.	.																	.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	N	L	S	I	G	V	C	C	N	D	D	G	D	L	H	I	F	D	S	V	L	N	A	D	K	L	V	T	E	N	Y	K	E	K	P	Y	L	L	G	N	G	T	E	D	F	S	T	L	T	Q	N	L	I	F	G	N	N	S	K	Y	I	E	D	K	K	I	C	T	I	Q	C	I	G	G	T	G	A	I
Template Known Secondary structure						S		S	S		B		T	T	S	S	B																								T	T	S	S															S	S		T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		63	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																.	.
Query SS confidence													.																																.	.
Query Sequence		L	V	A	L	L	S	H	C	E	R	G	.	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	.	.	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H
Query Conservation													.																																.	.
Alig confidence													.														.	.	.																.	.																			.
Template Conservation																											.	.	.																																				.
Template Sequence		F	V	L	L	E	F	L	K	M	L	N	V	E	T	L	Y	V	T	N	P	P	Y	I	N	H	.	.	.	V	N	M	I	E	S	R	G	F	N	L	K	Y	I	N	F	F	D	Y	N	L	I	D	I	N	Y	D	L	F	L	N	D	L	R	N	.	I	P	N	G	S	S	V	I	L	Q	I	S	C	Y	N	P
Template Known Secondary structure										T	T	T								S	S						.	.	.						T	T	T											T	T	T	T														.	S		S	S								S	S		T	T
Template Predicted Secondary structure																											.	.	.																																				.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																															.	.	.	.	.																											.	.	.	.
Query SS confidence																																															.	.	.	.	.																											.	.	.	.
Query Sequence		N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	.	.	.	.	.	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	.	.	.	.
Query Conservation																																															.	.	.	.	.																											.	.	.	.
Alig confidence																																															.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		C	S	V	N	I	E	E	K	Y	F	D	E	I	I	E	I	V	L	H	K	K	H	V	I	I	F	D	I	A	Y	Q	G	F	G	H	T	N	L	E	E	D	V	L	L	I	R	K	F	E	E	K	N	I	A	F	S	V	C	Q	S	F	S	K	N	M	S	L	Y	G	E	R	A	G	A	L	H	I	V	C	K
Template Known Secondary structure		T																												S		T	T	T	S	S	S	S	T	T	G	G	G								T	T	T										T	T	T	S			T	T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
							211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	.	.	.	.	.	.	.	.	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																																.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Q	E	E	K	K	I	V	F	N	N	L	C	F	I	V	R	K	F	Y	S	S	P	V	I	H	T	N	R	I	L	C	Q	L	L	N	N	Q	N	L	K	L	N	W	I	K	E	L	S	Q	L	S	Q	R	I	T	N	N	R	I	L	F	F	N	K	L	E	T	Y	Q	K	K	Y	N	L	N	Y	D	W	N
Template Known Secondary structure		S																	T	T	T	S	S																																																G	G	G	G	T					G	G
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	M	R	Q	D	T	N	M	L	F	V	R	V	G	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	S	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation
Alig confidence																		.	.	.	.																		.	.					.
Template Conservation																		.	.	.	.																		.	.					.
Template Sequence		V	Y	K	K	Q	R	G	L	F	S	F	V	P	L	L	A	.	.	.	.	K	I	A	E	H	L	K	T	H	H	I	Y	I	I	N	N	G	.	.	R	I	N	V	.	S	G	I	T	K	N	N	V	D	Y	I	A	D	K	I	C	L	S	L	S	Q
Template Known Secondary structure		G	G	S	S			S	S					G	G	G	G	.	.	.	.	G	G	T	T	T	T	T	T	T	T					T	T	S	.	.				G	.	G	G			T	T
Template Predicted Secondary structure																		.	.	.	.																		.	.					.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions