Job Description P75823 Confidence 99.92% Date Thu Jan 5 12:14:38 GMT 2012 Rank 198 Aligned Residues 311 % Identity 22% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																		.	.	.	.											.
Query SS confidence																		.	.	.	.	.	.	.	.																		.	.	.	.											.
Query Sequence		T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	.	.	.	.	.	.	.	.	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	.	.	.	.	A	A	E	L	S	G	K	E	A	A	.	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y
Query Conservation																		.	.	.	.	.	.	.	.																		.	.	.	.											.
Alig confidence																		.	.	.	.	.	.	.	.																		.	.	.	.											.
Template Conservation
Template Sequence		N	F	V	P	R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	E	F	A	N	V	Q	P	H	S	G	A	Q	A	N	A	A	V	L	H	A	L	M	S	P	G	E	R	L
Template Known Secondary structure													T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	.	.	.	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W
Query Conservation																															.	.	.
Alig confidence																															.	.	.																			.	.	.	.	.																		.	.	.
Template Conservation																																																				.	.	.	.	.																		.	.	.
Template Sequence		L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	.	.	.	.	.	R	P	K	V	I	I	A	G	W	S	A	Y	P	R	V	L	D	.	.	.	F	A	A	F	R
Template Known Secondary structure						G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	T		S														.	.	.	.	.			S							S	S			S				.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.																		.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.
Predicted Secondary structure																																																																													.	.	.	.
Query SS confidence																																																																													.	.	.	.
Query Sequence		E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G	G	G	M	.	.	.	.	R
Query Conservation																																																																													.	.	.	.
Alig confidence																																		.	.											.																															.	.	.	.
Template Conservation																																		.	.											.
Template Sequence		S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	.	.	A	D	V	V	S	T	T	V	H	T	.	L	G	G	G	R	S	G	L	I	V	G	K	Q	Q	Y	A	K	A	I	N	S	A	V	F	P	G	Q	Q	G	G	P	L	M	H	V
Template Known Secondary structure								T								T	T	T						T	T	S	S			S	T	T	T	.	.		S									.					S								G	G	G									T	T	T	T		S	S
Template Predicted Secondary structure																																		.	.											.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																				.	.	.	.	.											.	.											.	.
Query SS confidence																																				.	.	.	.	.											.	.											.	.
Query Sequence		Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	.	.	.	.	.	R	E	A	G	A	D	V	M	R	Q	.	.	D	T	N	M	L	F	V	R	V	G	.	.	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L
Query Conservation																																				.	.	.	.	.											.	.											.	.
Alig confidence																																				.	.	.	.	.											.	.											.	.
Template Conservation
Template Sequence		I	A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	V	S	G	G	T	D	V	H	L	V	L	V	D	L	R	D	S	P	L	D	G	Q	A	A	E	D	L	L	H	E	V	G	I	T
Template Known Secondary structure													T	S																						S	S						T	T				G	G	G	S		S	S	S							T	T	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		301	.	.	.													.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		I	N	A	S	.	.	.	.	.	.	.	.	.	.	.	.	P	I	V	R	L	V	T	H	.	.	.	.	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		V	N	R	N	A	V	P	N	D	P	R	P	P	M	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A	T	A	L
Template Known Secondary structure								T	T		S	S		T	T	T		S													T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions