Job Description P75823 Confidence 99.83% Date Thu Jan 5 12:14:38 GMT 2012 Rank 234 Aligned Residues 275 % Identity 17% Template c3gwpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.															.																	.	.	.
Query SS confidence												.	.	.	.	.	.															.																	.	.	.
Query Sequence		A	M	L	E	A	M	M	A	A	P	.	.	.	.	.	.	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	.	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	I	F	.	.	.	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y	I	V	G	Q	A	A	H	N
Query Conservation												.	.	.	.	.	.															.																	.	.	.
Alig confidence												.	.	.	.	.	.															.																	.	.	.
Template Conservation
Template Sequence		K	V	L	N	A	F	Q	E	E	R	I	S	E	A	H	F	T	N	S	S	G	Y	G	Y	G	D	I	G	R	D	S	L	D	A	V	Y	A	R	V	F	N	T	E	S	A	L	V	R	P	H	F	V	N	G	T	H	A	L	G	A	A	L	F	G	N	L	R	P	G	N	T	X	L	S	V	C	G	E	P	Y
Template Known Secondary structure										T	T			G	G	G	S					T	T		T	T															T	T		S					B	T	T			S															T	T						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		85	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	F	E	A	G	.	.	.	.	.	.	.	.	.	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																						.
Template Conservation																																																						.
Template Sequence		D	T	L	H	D	V	I	G	I	T	E	N	S	N	X	G	S	L	K	E	F	G	I	N	Y	K	Q	V	D	L	K	E	D	G	K	P	N	L	E	E	I	E	K	V	L	K	E	D	E	S	I	T	.	L	V	H	I	Q	R	S	T	G	Y	G	W	R	R	A	L	L	I	E	D	I	K	S	I	V	D	C
Template Known Secondary structure		T	T						T	S	S				T	T			T	G	G	G	T								B		T	T	S	S	B													T	T			.							S		T	T		S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		156	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																										.	.																	.	.
Query SS confidence							.	.																																										.	.																	.	.
Query Sequence		T	R	E	R	N	.	.	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	.	.	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	.	.	I	R	W	R	K	M	T	G	G	G	M	R
Query Conservation							.	.																																										.	.																	.	.
Alig confidence							.	.																				.	.	.	.	.																		.	.																	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		V	K	N	I	R	K	D	I	I	C	F	V	D	N	C	Y	G	E	F	X	D	T	K	E	P	T	.	.	.	.	.	D	V	G	A	D	L	I	A	G	S	L	I	N	I	G	G	G	I	A	P	T	G	G	Y	L	A	G	T	K	D	C	I	E	K	T	S	Y	R	L	T	V	P	G	I	G	G	E	C	G
Template Known Secondary structure							T	T	S							T	T		T	T	S	S	S	S		G	G	.	.	.	.	.	G	G	T		S									T	T	T	T	T			S																			S		T	T	T	G	G	G	S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	.	.	.	.	Q	D	T	N	M	L	F	V	R	V	G	E	E	N	A	A	A	L	G	E	Y	M	K	A
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.													.
Template Conservation																																																													.
Template Sequence		S	T	F	G	V	V	R	S	X	Y	Q	G	L	F	L	A	P	H	I	S	X	E	A	L	K	G	A	I	L	C	S	R	I	X	E	L	A	G	F	E	V	X	P	K	Y	D	E	K	R	S	D	I	I	Q	S	I	K	F	N	.	D	K	D	K	L	I	E	F	C	K	G
Template Known Secondary structure				T	T																																	T	T					S		T	T	S			S	S	S							S	.	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions