Job Description P75823 Confidence 99.97% Date Thu Jan 5 12:14:38 GMT 2012 Rank 60 Aligned Residues 318 % Identity 12% Template c3f0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		I	D	L	R	S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	.	.	.	.	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y	I
Query Conservation																																																		.	.	.	.
Alig confidence								.																																										.	.	.	.
Template Conservation								.
Template Sequence		L	N	F	T	V	G	.	P	V	X	S	S	E	E	V	R	A	I	G	A	E	Q	V	P	Y	F	R	T	T	E	F	S	S	T	X	L	E	N	E	K	F	X	L	E	Y	A	K	A	P	E	G	S	K	A	V	F	X	T	C	S	S	T	G	S	X	E	A	V	V	X	N	C	F	T	K	K	D	K	V	L
Template Known Secondary structure					S	S	S	.	S												T	S						S	S																			T			T	T							S	S																T	T
Template Predicted Secondary structure								.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R
Query Conservation
Alig confidence										.																																						.	.	.	.																			.	.	.
Template Conservation										.																																						.	.	.	.																			.	.	.
Template Sequence		V	I	D	G	G	S	F	G	.	H	R	F	V	Q	L	C	E	I	H	E	I	P	Y	V	A	L	K	L	E	H	G	K	K	L	T	K	E	K	L	Y	E	Y	D	N	Q	N	.	.	.	.	F	T	G	L	L	V	N	V	D	E	T	S	T	A	V	L	Y	D	.	.	.	T	X	X	I	G	E	F	C	K
Template Known Secondary structure					S	S				.										T	T										T	T										T	T	T	T	S		.	.	.	.								S			T	T	T	T					.	.	.
Template Predicted Secondary structure										.																																						.	.	.	.																			.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		K	N	N	X	F	F	V	C	D	C	V	S	A	F	L	A	D	.	.	.	.	.	P	F	N	X	N	E	C	G	A	D	V	X	I	T	G	S	Q	V	L	A	C	P	P	G	I	S	V	I	V	L	A	P	R	G	V	E	R	V	E	K	S	K	V	R	T	X	Y	F	D	L	K	D	A	L	K	N	Q	E
Template Known Secondary structure			T	T								T	T	T	T	T	T	S	.	.	.	.	.								T		S													S	S																T						S	T	T										T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
								223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																					.	.
Query SS confidence		.	.	.	.	.	.																																																					.	.
Query Sequence		.	.	.	.	.	.	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	.	.	T	N	M	L	F	V	R	V	G	E	E	N	A	A	A	L	G	E	Y	M
Query Conservation		.	.	.	.	.	.																																																					.	.
Alig confidence		.	.	.	.	.	.																																																					.	.
Template Conservation
Template Sequence		R	G	Q	T	P	F	T	P	A	V	G	I	L	L	Q	I	N	E	R	L	K	E	I	K	K	H	G	G	A	D	A	E	V	A	R	I	A	S	Q	A	A	D	F	R	A	K	I	K	D	L	P	F	E	L	V	S	E	S	P	A	N	G	V	T	S	V	H	P	T	T	A	N	A	Y	D	I	F	L	K	L
Template Known Secondary structure		T	T			S	S																				T	T																				T	T	T	S	S						S	S	B	B	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
			295	.	.	.	.	300	.	.	.	.							.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure		.											.	.	.	.	.	.
Query SS confidence		.											.	.	.	.	.	.
Query Sequence		.	K	A	R	N	V	L	I	N	A	S	.	.	.	.	.	.	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation		.											.	.	.	.	.	.
Alig confidence		.											.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	E	Y	G	I	W	I	C	P	N	G	G	E	X	K	D	T	I	F	R	V	G	H	I	G	A	L	T	H	E	D	N	T	T	L	V	N	A	F	K	D	L	Q	K	R
Template Known Secondary structure					S	S								G	G	G	T	T	T								S	S																			T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions