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Job DescriptionP75823
Confidence99.94%DateThu Jan 5 12:14:38 GMT 2012
Rank163Aligned Residues296
% Identity18%Templatec3ecdC_
PDB info PDB header:transferaseChain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIF. LPTGTQANLVALLSHCERGEEYIVGQAAHNYLFE
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Template Sequence  NIVSRAVLDAQGSVLTNKYAEGYDEVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLFNALQYG
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TSGGGSS
TT


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TT




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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  AGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERNLALHVDGA
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Template Sequence  VS. . . . . . . . . . . . . . . RDTMLIDYDQVEALAQQH. . . . . KPSLIIAGFSAYPRKLD. . . FARFRAIADSVGAKLMVDMA
Template Known Secondary structure  B
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   151. .......160.........170 .........180....... ..190.........200.......
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  RIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTGGGMRQSGILAAAGIYALKNNVAR
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Template Sequence  HIAGVIAAGRHANPVE. . HAHVVTSTTHKTLRGPRGGFVLTNDEEIAKKI. NSAVGPLMHVIAGKAVAFGEALTDDFKTY
Template Known Secondary structure  TTTTSS

GGG..T
SSSGGG
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   208.210.........220... ......230.........240.........250..... ....260.........270.........280....
 
   249250.........260.........270. ........280... ......290.........300.... .....310..
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Query Sequence  LQEDHDNAAWMAEQLREAGADVM. . RQDTNMLFVRVG. . EENAAALGEYMKARNVLINAS. . . . . . . . . . . . PIVRLVTH
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Template Sequence  IDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTP
Template Known Secondary structure  TT
GGGS
SSS
GGGT

TT



TT
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   291........300.........310.........320.........330.........340.........350.........360.........370
 
   313......320.........330.
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Query Sequence  . . . . LDVSREQLAEVAAHWRAFL
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Template Sequence  AGTTRGFGAAEFREVGRLILEVF
Template Known Secondary structure  TT

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   371........380.........390...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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