Job Description P75823 Confidence 99.90% Date Thu Jan 5 12:14:38 GMT 2012 Rank 216 Aligned Residues 307 % Identity 16% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.													.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Query Sequence		D	L	R	S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	T	.	.	.	.	.	.	.	.	.	.	.	.	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	.	.	.	A	A	I	F	L	P	T	.	G	T	Q	A	N	L	V	A	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Alig confidence									.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Template Conservation									.	.	.	.
Template Sequence		Y	F	Q	S	M	L	P	.	.	.	.	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V	P
Template Known Secondary structure				S					.	.	.	.										T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S																			T			T	T							S	S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		67	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		L	S	H	C	E	.	.	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L
Query Conservation							.	.
Alig confidence							.	.																	.																																				.	.	.	.
Template Conservation																									.																																				.	.	.	.
Template Sequence		L	N	L	I	G	L	K	A	G	R	C	A	D	Y	V	V	T	G	A	W	S	A	K	.	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	.	.	.	.	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F
Template Known Secondary structure					G	G	G	S	T	T									S						.						T	T	T	S						S				S	S	S		S				G	G	G					T	T	.	.	.	.		S						S			T	T	T	T
Template Predicted Secondary structure																									.																																				.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	F	I	P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	V	D	.	.	.	.	.	.	.	V	S	K	F	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	S					T	T								T	T	T	T	T	S	S				.	.	.	.	.	.	.	G	G	G		S						G	G	G	T	T	S		T	T								T	T	S		S				T	T	S		G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		163									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
					214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.
Predicted Secondary structure		.	.	.																																.	.																							.									.	.	.	.	.
Query SS confidence		.	.	.																																.	.																							.									.	.	.	.	.
Query Sequence		.	.	.	I	K	R	A	I	R	W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	.	.	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	.	G	A	D	V	M	R	Q	D	.	.	.	.	.	T	N	M	L	F	V	R	V
Query Conservation		.	.	.																																.	.																							.									.	.	.	.	.
Alig confidence		.	.	.																																.	.																							.									.	.	.	.	.
Template Conservation
Template Sequence		L	E	Y	K	V	Q	A	G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	I	P	F	R	I
Template Known Secondary structure		G							T	T	T	T		S	S																				T	T																						T	S	T	T	S					S		G	G	G	B		S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		283	.	.	.						.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure						.	.	.	.	.																			.	.	.	.
Query SS confidence						.	.	.	.	.																			.	.	.	.
Query Sequence		G	E	E	N	.	.	.	.	.	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	S	.	.	.	.	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation						.	.	.	.	.																			.	.	.	.
Alig confidence						.	.	.	.	.																			.	.	.	.
Template Conservation
Template Sequence		G	N	A	K	G	D	D	A	L	E	K	R	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M
Template Known Secondary structure		S	S	T	T																T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions