Job Description P75823 Confidence 99.95% Date Thu Jan 5 12:14:38 GMT 2012 Rank 131 Aligned Residues 332 % Identity 14% Template c3dxvA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alpha-amino-epsilon-caprolactam racemase; PDBTitle: the crystal structure of alpha-amino-epsilon-caprolactam racemase from2 achromobacter obae Resolution 2.21 Å

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		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.													.	.	.	.																								.	.	.																				.	.	.
Query SS confidence														.	.	.	.													.	.	.	.																								.	.	.																				.	.	.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	.	.	.	.	S	R	A	M	L	E	A	M	M	A	A	P	.	.	.	.	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	.	.	.	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	.	.	.
Query Conservation														.	.	.	.													.	.	.	.																								.	.	.																				.	.	.
Alig confidence														.	.	.	.													.	.	.	.																								.	.	.																				.	.	.
Template Conservation
Template Sequence		L	I	D	L	S	G	A	W	G	A	A	S	L	G	Y	G	H	P	A	I	V	A	A	V	S	A	A	A	A	N	P	A	G	A	T	I	L	S	A	S	N	A	P	A	V	T	L	A	E	R	L	L	A	S	F	P	G	E	G	T	H	K	I	W	F	G	H	S	G	S	D	A	N	E	A	A	Y	R	A	I
Template Known Secondary structure					S	S	T	T	T	T	T		T	T		B	S														S		S		S		S	S	S	S															T	T	T		T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		L	S	H	C	E	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	.	.	.	.	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K
Query Conservation																																						.	.	.	.
Alig confidence																																						.	.	.	.
Template Conservation
Template Sequence		V	K	A	T	G	R	S	G	V	I	A	F	A	G	A	Y	H	G	C	T	V	G	S	M	A	F	S	G	L	I	L	L	P	Y	P	D	P	Y	R	P	Y	R	N	D	P	T	G	D	A	I	L	T	L	L	T	E	K	L	A	A	V	P	A	G	S	I	G	A	A	F	I	E	P	I	Q	S	D	G	G	L
Template Known Secondary structure						S								T	T					S	S					T	T											S	S	S		B	T	T	B	T	T	S													T	S		T	T									S	S	B	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		143	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.
Predicted Secondary structure								.																																																																							.	.
Query SS confidence								.																																																																							.	.
Query Sequence		V	L	P	R	E	Y	.	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	.	.	R
Query Conservation								.																																																																							.	.
Alig confidence								.																																																			.																				.	.
Template Conservation																																																											.
Template Sequence		I	V	P	P	D	G	F	L	R	K	F	A	D	I	C	R	A	H	G	I	L	V	V	C	D	E	V	K	V	G	L	A	R	S	G	R	L	H	C	F	E	H	E	G	F	V	P	D	I	L	V	L	G	K	G	L	G	.	G	G	L	P	L	S	A	V	I	A	P	A	E	I	L	D	C	A	S	A	F	A
Template Known Secondary structure		B				T	T												T	T								T	T	T		T	T	T	T	S	S	S	S	G	G	G	G	T	T				S						G	G	G	G	.	T	T	S													T	S		S	S	S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.										.	.	.	.	.	.
Predicted Secondary structure																																														.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	.	.	R	E	A	G	A	D	V	M	R	Q	D	T	N	M	L	F	V	R	V	.	.	.	.	.	.	.	.	.	G	E	E	N	A	A
Query Conservation																																														.	.																				.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	T	L	H	G	N	P	I	S	A	A	A	G	L	A	V	L	E	T	I	D	R	D	D	L	P	A	M	A	E	R	K	G	R	L	L	R	D	G	L	S	E	L	A	K	R	H	P	L	I	G	D	I	R	G	R	G	L	A	C	G	M	E	L	V	C	D	R	Q	S	R	E	P	A	R	A	E	T	A
Template Known Secondary structure				T	T	T	T																		T	T																								T	T								T	T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	.	.	.	.	S	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		K	L	I	Y	R	A	Y	Q	L	G	L	V	V	Y	Y	V	G	M	N	G	N	V	L	E	F	T	P	P	L	T	I	T	E	T	D	I	H	K	A	L	D	L	L	D	R	A	F	S	E
Template Known Secondary structure											T							S	T	T	S									T	T																			T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions