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Job DescriptionP75823
Confidence99.97%DateThu Jan 5 12:14:38 GMT 2012
Rank59Aligned Residues326
% Identity14%Templatec3cbfA_
PDB info PDB header:transferaseChain: A: PDB Molecule:alpha-aminodipate aminotransferase; PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10. ........20....... ..30.........40........ .50.........60.........70.
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Query Sequence  MIDLRSDTVTR. . . PSRAMLEAMMAAPVGD. . . . DVYGDDPTVNALQDYAAELSG. . KEAAIFLPTGTQANLVALLSHCE
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Template Sequence  ILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLD
Template Known Secondary structure 
SS



GGGS
TS


TT

TS
GGGSS

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   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  RGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKE
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Template Sequence  EGSPVLLEAPSYMGA. . . IQAFRLQGPRFLTVPAGEE. GPDLDALEEVLKRE. . RPRFLYLIPSFQNPTGGLTPLPARKR
Template Known Secondary structure  TT
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BS
TTT

B

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   114.....120........ .130.........140....... ..150.........160. ........170.........180.......
 
   152.......160.........170.........180.... .....190.........200.........210.........220.....
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Query Sequence  AWEFTRERNLALHVDGARIFNAVVAYGCELKEI. . . . . . TQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTG
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Template Conservation 
           
 
                                
                                
Template Sequence  LLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGAD
Template Known Secondary structure  T


TTTT
B
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T


STTTT
STT



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   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   226...230.........240. ........250.........260..... ....270.... .....280..... ....290.......
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Query Sequence  GGMRQSGILAAAGIYA. . . LKNNVARLQEDHDNAAWMAEQLRE. . . AGADVMRQD. TNMLFVRVGEE. NAAALGEYMKAR
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Template Conservation                
                         
            
       
          
   
   
Template Sequence  LHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEE
Template Known Secondary structure  SS

TTTS
TTS


SBSS

TT

T
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   268.270.........280.........290.........300.........310.........320.........330.........340.......
 
   298.300.... .....310.........320.........330...
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Query Sequence  NVLINAS. . . . . . . . . . PIVRLVTHLDVSREQLAEVAAHWRAFLAR
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Template Sequence  NVAFVPGGPFFANGGGENTLRLSYA. TLDREGIAEGVRRLGRALKG
Template Known Secondary structure  TSGGG
TTS

TT
S.SS
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   348.350.........360.........370.. .......380.........390..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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