Job Description P75823 Confidence 99.82% Date Thu Jan 5 12:14:38 GMT 2012 Rank 235 Aligned Residues 297 % Identity 14% Template c3bwnF_ PDB info PDB header:transferase Chain: F: PDB Molecule:l-tryptophan aminotransferase; PDBTitle: l-tryptophan aminotransferase Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																	.										.	.	.	.	.													.	.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence																	.										.	.	.	.	.													.	.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	S	R	A	.	M	L	E	A	M	M	A	A	P	.	.	.	.	.	V	G	D	D	V	Y	G	D	D	P	T	V	.	.	.	.	.	N	A	L	Q	D	Y	A	A	E	L	.	.	.	.	.	.	.	.	S	G	K	E	A	A	I	F	L	P	T	G	T	Q	A
Query Conservation																	.										.	.	.	.	.													.	.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence																	.										.	.	.	.	.													.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	N	L	D	H	G	D	P	T	A	Y	E	E	Y	W	R	K	M	G	D	R	C	T	V	T	I	R	G	C	D	L	M	S	Y	F	S	D	M	T	N	L	C	W	F	L	E	P	E	L	E	D	A	I	K	D	L	H	G	V	V	G	N	A	A	T	E	D	R	Y	I	V	V	G	T	G	S	T	Q	L
Template Known Secondary structure						S	S				G	G	G								G	G	G	G						T	T	T	T		S	S		S		T	T	S	S	S	T	T	S																	S	B			T	T	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		N	L	V	A	L	L	S	H	C	E	R	G	E	E	.	.	.	.	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.												.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	Q	A	A	V	H	A	L	S	S	L	A	R	S	Q	P	V	S	V	V	A	A	A	P	F	Y	S	T	Y	.	.	.	V	E	E	T	T	Y	V	R	S	G	M	Y	K	W	E	G	D	A	W	G	F	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	P	Y	I	E	L	V	T	S	P	N
Template Known Secondary structure													S	S	S	S	S							S	S						.	.	.						T	T			T	T							S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								S	S
Template Predicted Secondary structure																															.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.														.	.	.	.	160	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	.	L	V	G	N	R	D	Y	I	K	R
Query Conservation																																																																							.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																												.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		N	P	D	G	T	I	R	E	.	.	.	.	.	.	.	.	.	.	.	.	T	V	V	A	K	V	I	H	D	F	A	Y	Y	W	P	H	Y	T	P	.	.	.	I	T	R	R	Q	D	H	D	I	M	L	F	T	F	S	K	I	T	G	H	A	G	S	R	I	G	W	A	L	V	K	D	K	E	V	A	K	K
Template Known Secondary structure		T	T	T						.	.	.	.	.	.	.	.	.	.	.	.											T	T		S	T	T	T	S		.	.	.			S		B			S													G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.													.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.													.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		A	I	R	W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	.	.	.	.	.	.	.	.	.	.	.	.	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	.	.	.	.	A	D	V	M	R	Q	D	T	N	M	L	F	V
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		M	V	E	Y	I	I	V	N	S	I	G	V	S	K	E	S	Q	V	R	T	A	K	I	L	N	V	L	K	E	T	C	K	S	E	S	E	S	E	N	F	F	K	Y	G	R	E	M	M	K	N	R	W	E	K	L	R	E	V	V	K	E	S	D	A	F	T	L	P	K	Y	P	E	A	F	C	N	Y	F	G	K
Template Known Secondary structure											S	S																					T			S	T	T	T	S																						T	S	S	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		281	.	.	.										.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.								.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		R	V	G	E	.	.	.	.	.	.	.	.	.	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	S	.	.	.	.	.	.	.	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F
Query Conservation						.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.									.	.
Template Conservation																																																		.	.
Template Sequence		S	L	E	S	Y	P	A	F	A	W	L	G	T	K	E	E	T	D	L	V	S	E	L	R	R	H	K	V	M	S	R	A	G	E	R	C	G	S	D	K	K	H	V	R	V	S	M	L	.	.	S	R	E	D	V	F	N	V	F	L	E	R	L	A	N	M
Template Known Secondary structure								S							S	S	S									T	T	T						T	G	G	G	T	S		T	T						S		.	.	S															T
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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