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Job DescriptionP75823
Confidence99.95%DateThu Jan 5 12:14:38 GMT 2012
Rank129Aligned Residues332
% Identity13%Templatec3a8uX_
PDB info PDB header:transferaseChain: X: PDB Molecule:omega-amino acid--pyruvate aminotransferase; PDBTitle: crystal structure of omega-amino acid:pyruvate aminotransferase
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.. .......20..... ....30.........40....... ..50.........60.........
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Query Sequence  IDLRSDTVTRP. . . . SRAMLEAMMAAPV. . . . GDDVYGDDPTVNALQDYAAELS. . GKEAAIFLPTGTQANLVALLSH. .
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Template Sequence  YDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRA
Template Known Secondary structure  TTT
TT
BS
TTT
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SSS


TTSSTTSS
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   53......60.........70.........80.........90.........100.........110.........120.........130..
 
   70.........80.........90......... 100.........110.........120
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Query Sequence  . . . . . . . CERGEEYIVGQAAHNYLFEAGGAAVLGSIQ. . . . . . . . . . . . . . . . . . . . . . PQPIDAAADGTLPLDKVAMKI
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Template Sequence  YWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLI
Template Known Secondary structure  TT
TT

TT



SS


TTT


S
S




GGGTT
SSS
SSS
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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   121........130.........140... ......150.........160.........170.........180.........190.........
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Query Sequence  KPDDIHFARTKLLSLENTHNGKV. LPREYLKEAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGL
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Template Sequence  ELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTN
Template Known Secondary structure 
GGG
SSBTTTT
B


TTT

TTTTTTTTSSSST


S
GGGGT
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   213......220.........230.........240.........250.........260.........270.........280.........290..
 
   200.........210.........220 .........230.........240.........250.........260......
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Query Sequence  GTPVGSLLVGNRDYIKRAIRW. . . . . . . . . RKMTGGGMRQSGILAAAGIYALKNNVARLQEDHDNAAWMAEQLREA. . . .
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Template Sequence  GAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAK
Template Known Secondary structure  TSS

T
SS
TTS
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TTTT
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   293......300.........310.........320.........330.........340.........350.........360.........370..
 
   267..270.........280...... ...290.........300... ......310.........320.........330...
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Query Sequence  GADVMRQDTNMLFVRVGEEN. . . . . . AAALGEYMKARNVLINA. SPIVRLVTHLDVSREQLAEVAAHWRAFLAR
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Template Sequence  NVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGGDTLQFGPTFNSKPQDLDRLFDAVGEVLNK
Template Known Secondary structure  TTT

BTTBSST
TT


TT

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   373......380.........390.........400.........410.........420.........430.........440......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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