Job Description P75823 Confidence 100.00% Date Thu Jan 5 12:14:38 GMT 2012 Rank 8 Aligned Residues 322 % Identity 16% Template c3a2bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: crystal structure of serine palmitoyltransferase from sphingobacterium2 multivorum with substrate l-serine Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure														.	.													.	.	.	.	.	.	.	.
Query SS confidence														.	.													.	.	.	.	.	.	.	.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	.	.	S	R	A	M	L	E	A	M	M	A	A	P	.	.	.	.	.	.	.	.	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C
Query Conservation														.	.													.	.	.	.	.	.	.	.
Alig confidence														.	.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	M	F	G	S	N	S	Y	L	G	L	T	T	D	T	R	I	I	K	A	A	Q	D	A	L	E	K	Y	G	T	G	C	A	G	S	R	F	L	N	G	T	L	D	I	H	V	E	L	E	E	K	L	S	A	Y	V	G	K	E	A	A	I	L	F	S	T	G	F	Q	S	N	L	G	P	L	S	C	L	M
Template Known Secondary structure						S		S		T	T		G	G	G																	S				S	B	T	T	T	T																		T		S						S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K
Query Conservation
Alig confidence																		.	.	.																		.	.	.	.	.																																			.	.	.
Template Conservation																		.	.	.																		.	.	.	.	.																																			.	.	.
Template Sequence		G	R	N	D	Y	I	L	L	D	E	R	D	H	A	S	I	.	.	.	I	D	G	S	R	L	S	F	S	K	V	I	K	Y	G	H	N	.	.	.	.	.	N	M	E	D	L	R	A	K	L	S	R	L	P	E	D	S	A	K	L	I	C	T	D	G	I	F	S	M	E	G	D	I	V	N	.	.	.	L	P
Template Known Secondary structure			T	T							T	T						.	.	.							S	S	S							T	T	.	.	.	.	.											T	S		S	S	S								S	B		T	T	T			B			.	.	.
Template Predicted Secondary structure																		.	.	.																		.	.	.	.	.																																			.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	.	.	.	.	.	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.
Template Conservation
Template Sequence		E	L	T	S	I	A	N	E	F	D	A	A	V	M	V	D	D	A	H	S	L	G	V	I	G	H	K	G	A	G	T	A	S	H	F	G	L	N	D	D	V	D	L	I	M	G	T	F	S	K	S	L	A	S	L	G	G	F	V	A	G	D	A	D	V	I	D	F	L	K	H	N	A	R	S	V	M	F	S	A
Template Known Secondary structure											T								T	T	T	T	T	T	S	S	G	G	G								T		G	G	G		S						S	S	S	T	T		S	S																							S	S	B
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	T	N	M	L	F	V	R	V	G	E	.	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	S
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		S	M	T	P	A	S	V	A	S	T	L	K	A	L	E	I	I	Q	N	E	P	E	H	I	E	K	L	W	K	N	T	D	Y	A	K	A	Q	L	L	D	H	G	F	D	L	G	A	T	E	S	P	I	L	P	I	F	I	R	S	N	E	K	T	F	W	V	T	K	M	L	Q	D	D	G	V	F	V	N	P	V
Template Known Secondary structure																						T																				T	T			B		S			S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		305										.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	.	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	P	A	V	P	A	E	E	S	L	I	R	F	S	L	M	A	T	H	T	Y	D	Q	I	D	E	A	I	E	K	M	V	K	V	F	K	Q
Template Known Secondary structure			T	T	T	S		G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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