Job Description P75823 Confidence 99.96% Date Thu Jan 5 12:14:38 GMT 2012 Rank 119 Aligned Residues 321 % Identity 15% Template c2z9wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of pyridoxamine-pyruvate aminotransferase complexed2 with pyridoxal Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	.	.	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y	I	V
Query Conservation																																																		.	.
Alig confidence									.																																									.	.
Template Conservation									.
Template Sequence		V	I	T	L	T	A	G	.	P	V	N	A	Y	P	E	V	L	R	G	L	G	R	T	V	L	Y	D	Y	D	P	A	F	Q	L	L	Y	E	K	V	V	D	K	A	Q	K	A	M	R	L	S	N	K	P	V	I	L	H	G	E	P	V	L	G	L	E	A	A	A	A	S	L	I	S	P	D	D	V	V	L	N
Template Known Secondary structure		S					S	S	.	S											T	T	S					T	T	S																		T	T		S	S						S	S		T														T	T
Template Predicted Secondary structure									.
Template SS confidence
		11	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E
Query Conservation
Alig confidence									.																																									.	.																		.	.	.
Template Conservation									.																																									.	.																		.	.	.
Template Sequence		L	A	S	G	V	Y	G	.	K	G	F	G	Y	W	A	K	R	Y	S	P	H	L	L	E	I	E	V	P	Y	N	E	A	I	D	P	Q	A	V	A	D	M	L	K	A	H	P	E	I	.	.	T	V	V	S	V	C	H	H	D	T	P	S	G	T	I	N	P	.	.	.	I	D	A	I	G	A	L	V	S	A
Template Known Secondary structure				S	S				.												S									T	T	S															T	T		.	.							S			G	G	G	T					.	.	.
Template Predicted Secondary structure									.																																									.	.																		.	.	.
Template SS confidence
		90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	.	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		H	G	A	Y	L	I	V	D	A	V	S	S	F	G	G	M	.	.	.	.	.	K	T	H	P	E	D	C	K	A	D	I	Y	V	T	G	P	N	K	C	L	G	A	P	P	G	L	T	M	M	G	V	S	E	R	A	W	A	K	M	K	A	N	P	L	A	P	R	A	S	M	L	S	I	V	D	W	E	N	A
Template Known Secondary structure		T	T								T	T	T	B	T	T	B	.	.	.	.	.	S			G	G	G	T	T		S						S	S	S	T	T				S																	T		T	T	S			S	S	T	T		S	G	G	G	T	T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
									222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.		.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																						.	.	.	.	.										.
Query SS confidence		.	.	.	.	.	.	.																																																						.	.	.	.	.										.
Query Sequence		.	.	.	.	.	.	.	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	.	.	.	.	.	T	N	M	L	F	V	R	V	G	.	E	E	N	A	A
Query Conservation		.	.	.	.	.	.	.																																																						.	.	.	.	.										.
Alig confidence		.	.	.	.	.	.	.																																																						.	.	.	.	.										.
Template Conservation
Template Sequence		W	S	R	D	K	P	F	P	F	T	P	S	V	S	E	I	N	G	L	D	V	A	L	D	L	Y	L	N	E	G	P	E	A	V	W	A	R	H	A	L	T	A	K	A	M	R	A	G	V	T	A	M	G	L	S	V	W	A	A	S	D	S	I	A	S	P	T	T	T	A	V	R	T	P	D	G	V	D	E	K
Template Known Secondary structure		T	S	T	T	S			S	S																																												T			B	S	S	S	S	G	G	G	B		S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.							.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure											.								.	.	.	.	.	.								.
Query SS confidence											.								.	.	.	.	.	.								.
Query Sequence		A	L	G	E	Y	M	K	A	R	.	N	V	L	I	N	A	S	.	.	.	.	.	.	P	I	V	R	L	V	T	.	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation											.								.	.	.	.	.	.								.
Alig confidence											.								.	.	.	.	.	.								.
Template Conservation
Template Sequence		A	L	R	Q	A	A	R	A	R	Y	G	V	V	F	S	S	G	R	G	E	T	L	G	K	L	T	R	I	G	H	M	G	P	T	A	Q	P	I	Y	A	I	A	A	L	T	A	L	G	G	A	M	N	A
Template Known Secondary structure																B				G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions