Job Description P75823 Confidence 99.95% Date Thu Jan 5 12:14:38 GMT 2012 Rank 135 Aligned Residues 322 % Identity 18% Template c2yrrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8 Resolution 1.86 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	.	.	.	.	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y
Query Conservation																																																					.	.	.	.
Alig confidence									.																																												.	.	.	.																			.
Template Conservation									.																																																																		.
Template Sequence		M	L	L	L	T	P	G	.	P	T	P	I	P	E	R	V	Q	K	A	L	L	R	P	M	R	G	H	L	D	P	E	V	L	R	V	N	R	A	I	Q	E	R	L	A	A	L	F	D	P	G	E	G	A	L	V	A	A	L	A	G	S	G	S	L	G	M	E	A	G	L	A	N	L	.	D	R	G	P	V	L
Template Known Secondary structure						S	S	S	.	S									G	G	G	G	S					T	T																							T	T							S	S												T		.	S
Template Predicted Secondary structure									.																																																																		.
Template SS confidence
		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T
Query Conservation
Alig confidence													.	.																																		.	.	.																								.	.	.
Template Conservation													.	.																																		.	.	.																								.	.	.
Template Sequence		V	L	V	N	G	A	F	S	Q	R	V	.	.	A	E	M	A	A	L	H	G	L	D	P	E	V	L	D	F	P	P	G	E	P	V	D	P	E	A	V	A	R	A	L	K	R	.	.	.	R	R	Y	R	M	V	A	L	V	H	G	E	T	S	T	G	V	L	N	P	A	E	A	.	.	.	I	G	A	L	A
Template Known Secondary structure						S							.	.							T	T										T	T	S														.	.	.	S			S						S			T	T	T	T								.	.	.
Template Predicted Secondary structure													.	.																																		.	.	.																								.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.															.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	A	G	A	L	F	F	L	D	A	V	T	T	L	G	M	L	P	F	S	M	R	A	M	G	V	D	Y	A	F	T	G	S	Q	K	C	L	S	A	P	P	G	L	A	P	I	A	A	S	L	E	A	R	K	A	F	T	G	K	R	G	W	Y	L	D	L	A	R	V	A	E	H	W	E	R	G	G	Y	H
Template Known Secondary structure					T								T	T	T	T	T	T	S								T		S						T	T	S	T	T				S	S																		S		S	T	T										T	T				S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.									.
Query SS confidence																																																							.	.	.									.
Query Sequence		M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	T	.	.	.	N	M	L	F	V	R	V	G	.	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N
Query Conservation																																																							.	.	.									.
Alig confidence																																																							.	.	.									.
Template Conservation
Template Sequence		H	T	T	P	V	L	L	H	Y	A	L	L	E	A	L	D	L	V	L	E	E	G	V	A	A	R	E	R	R	A	R	E	V	Y	A	W	V	L	E	E	L	K	A	R	G	F	R	P	Y	P	K	A	S	P	L	P	T	V	L	V	V	R	P	P	E	G	V	D	A	D	R	L	V	R	A	L	Y	A	E	G
Template Known Secondary structure		S																																											T	T				S		S	S	S	B		T	T								T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		299	300	.	.	.	.							.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure								.	.	.	.	.	.								.
Query SS confidence								.	.	.	.	.	.								.
Query Sequence		V	L	I	N	A	S	.	.	.	.	.	.	P	I	V	R	L	V	T	.	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A
Query Conservation								.	.	.	.	.	.								.
Alig confidence								.	.	.	.	.	.								.
Template Conservation
Template Sequence		V	A	V	A	G	G	I	G	P	T	R	G	Q	V	L	R	L	G	L	M	G	E	G	A	R	R	E	A	Y	Q	A	F	L	K	A	L	D	R	A	L	A
Template Known Secondary structure									G	G	G	T	T	T							S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions