Job Description P75823 Confidence 99.97% Date Thu Jan 5 12:14:38 GMT 2012 Rank 34 Aligned Residues 312 % Identity 19% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		G	R	P	N	R	I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	S	N	G	G	P	L	V	R	E	F	E	E	R	V	A	G	L	A	G	V	R	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	.	G	L	T	G	E	V	I	M	P	S	M	T	F	A	A
Template Known Secondary structure		T																					T			S	S	S																T	S	S						S														.	T			S						S	S	S		T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		2024	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.		.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	.	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H
Query Conservation																									.
Alig confidence			.	.	.																				.															.	.	.	.	.	.	.																	.	.	.
Template Conservation			.	.	.																																			.	.	.	.	.	.	.																	.	.	.
Template Sequence		T	.	.	.	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	.	.	.	.	.	.	.	R	T	S	A	V	V	G	V	H	L	W	G	R	P	C	A	.	.	.	A	D	Q	L	R	K	V	A	D	E	H	G	L	R	L	Y
Template Known Secondary structure			.	.	.							T	T								B		T	T	T	S	S	B		S	T	T							T	.	.	.	.	.	.	.	T									G	G	G					.	.	.												T
Template Predicted Secondary structure			.	.	.																																			.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		2103				.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.								.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.				.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.												.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	.	.	.	.	.	.	.	.	.	.	.	T	G	G	G	M	R	Q	S	G	I
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		F	D	A	A	H	A	L	G	C	A	V	D	G	R	P	A	G	S	.	.	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S	P	A	G	G	T	N	A	K	M	S	E	A
Template Known Secondary structure					T	T		T	T				T	T			T	T	S	.	.	S	S	S	S							T	T	S	S	S			S	S							S												T	B	T	T	T	T		T	T			T	T				B		B
Template Predicted Secondary structure																				.	.
Template SS confidence
		2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.			.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.								.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.										.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.										.	.	.	.
Query Sequence		L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	.	.	.	.	.	.	.	T	N	M	L	F	V	R	V	G	.	.	.	.	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N
Query Conservation																																											.	.	.	.	.	.	.										.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.										.	.	.	.
Template Conservation
Template Sequence		A	A	A	M	G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T	G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R
Template Known Secondary structure																															T		S		T	T						G	G	G	G	S	B																S	S												T	T				B
Template Predicted Secondary structure
Template SS confidence
		2248	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.
		303																												.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A	T	R
Template Known Secondary structure			T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T																			S
Template Predicted Secondary structure
Template SS confidence
		2328	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions