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Job DescriptionP75823
Confidence99.97%DateThu Jan 5 12:14:38 GMT 2012
Rank42Aligned Residues305
% Identity19%Templatec2ogeC_
PDB info PDB header:transferaseChain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60......... 70.........80.........90..
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Query Sequence  RAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQANLVALLSH. CERGEEYIVGQAAHNYLFEAGGA
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Template Sequence  AETDAAIARVLDSGR. YLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIAS. . . WLA
Template Known Secondary structure  T
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SSSTTSSS
TT

TT
SSS
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   24.....30........ .40.........50.........60.........70.........80.........90...... ...
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  AVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERNLALHVDGARIFN
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Template Sequence  VSATGATPVPVEPHEDHPTLDPLLVEKAITP. . . . . . RTRALLPVHLYGHPAD. . . MDALRELADRHGLHIVEDAAQAHG
Template Known Secondary structure  TTT

B
SSSSSB
GGG

S......S

B
GGG



...TT


TT
TT
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   100.........110.........120.........130 .........140...... ...150.........160.........170
 
   173......180.........190.........200.........210.........220.... .....230.........240.
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Query Sequence  AVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMT. . . . . . . . . . . GGGMRQSGILAAAGIYA
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Template Sequence  ARYRGRRIGA. . GSSVAAFSFYPGNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIR
Template Known Secondary structure 
TTTT
..TT








SS

S
TBTT
SBTTB
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B



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   171........180 .........190.........200.........210.........220.........230.........240........
 
   242.......250.........260.........270.... .....280.........290.........300.....
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Query Sequence  LKNNVARLQEDHDNAAWMAEQLREAGADVMRQD. . . . . TNMLFVRVGEENAAALGEYMKARNVLINASP. . . . . . . . . . .
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Template Sequence  LAHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHLSPAYA
Template Known Secondary structure  TTTT
TTSB




TT


S

TTTTB

B
S
SS
GGGSGGGT
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   250.........260.........270.........280.........290.........300.........310.........320.........
 
   306...310.........320.........330...
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Query Sequence  . . . . . . . . . . . . . . . . . . IVRLVTHLDVSREQLAEVAAHWRAFLAR
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Template Sequence  GEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAER
Template Known Secondary structure  TTS

TTS


STT

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   330.........340.........350.........360.........370.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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