Job Description P75823 Confidence 99.93% Date Thu Jan 5 12:14:38 GMT 2012 Rank 188 Aligned Residues 298 % Identity 17% Template c2nmpC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		L	R	S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	.	.	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	C	E	R	G	E	E	Y	I	V	G	Q	A
Query Conservation																														.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.								.	.																																.
Template Conservation													.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		S	L	S	T	T	F	K	Q	G	A	P	.	.	.	.	.	.	.	.	.	.	G	Q	G	F	E	Y	S	R	S	G	N	P	T	R	N	C	L	E	K	A	V	A	A	L	D	G	A	K	Y	C	L	A	F	A	S	G	L	A	A	T	.	V	T	I	T	H	L	L	K	A	G	D	Q	I	I	C	M	D	D
Template Known Secondary structure					S	B				S	S	T	.	.	.	.	.	.	.	.	.	.	T					B	G	G	G																T	T		S						S	S						.					T	T	S		T	T							S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		82	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		A	H	N	Y	L	F	E	.	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N
Query Conservation									.
Alig confidence									.																			.	.	.	.	.													.	.	.	.																			.	.	.
Template Conservation																												.	.	.	.	.													.	.	.	.																			.	.	.
Template Sequence		V	Y	G	G	T	N	R	Y	F	R	Q	V	A	S	E	F	G	L	K	I	S	F	V	D	C	S	.	.	.	.	.	K	I	K	L	L	E	A	A	I	T	P	E	.	.	.	.	T	K	L	V	W	I	E	T	P	T	N	P	T	Q	K	V	I	D	.	.	.	I	E	G	C	A	H	I	V	H	K	H	G
Template Known Secondary structure													T	G	G	G	T	T									S	.	.	.	.	.	S										T	T	.	.	.	.								S	S		T	T	T						.	.	.									T	T	S	S
Template Predicted Secondary structure																												.	.	.	.	.													.	.	.	.																			.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180
			161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.																																											.	.	.	.
Query SS confidence		.																																											.	.	.	.
Query Sequence		.	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	.	.	.	.	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A
Query Conservation		.																																											.	.	.	.
Alig confidence		.															.	.	.	.	.	.																							.	.	.	.																								.	.
Template Conservation																	.	.	.	.	.	.																																																		.	.
Template Sequence		D	I	I	L	V	V	D	N	T	F	M	S	P	Y	F	.	.	.	.	.	.	Q	R	P	L	A	L	G	A	D	I	S	M	Y	S	A	T	K	Y	M	N	G	H	S	D	V	V	M	G	L	V	S	V	N	C	E	S	L	H	N	R	L	R	F	L	Q	N	S	L	G	.	.	A	V	P	S	P	I	D	C
Template Known Secondary structure		S								T	T	T					.	.	.	.	.	.			T	T	T	T	T		S						T	T	T	T	T	T		S	S	S																										.	.
Template Predicted Secondary structure																	.	.	.	.	.	.																																																		.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.																				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	M	R	Q	D	T	N	M	L	F	V	R	V	G	E	E	.	.	N	A	A	A	L	G	E	Y	M
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		Y	L	C	N	R	G	L	K	T	L	H	V	R	M	E	K	H	F	K	N	G	M	A	V	A	Q	F	L	E	S	N	P	W	V	E	K	V	I	Y	P	G	L	P	S	H	P	Q	H	E	L	V	K	R	Q	C	T	G	C	T	G	M	V	T	F	Y	I	K	G	T	L	Q	H	A	E	I	F	L	K	N	L
Template Known Secondary structure									T	T																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		295	.	.	.	.	300	.	.	.	.	.																														.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	R	N	V	L	I	N	A	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	F	T	L	A	E	S	L	G	G	F	E	S	L	A	E	L	P	A	I	M	T	H	A	S	V	L	K	N	D	R	D	V	L	G	I	S	D	T	L	I	R	L	S	V	G	L	E	D	E	E	D	L	L	E	D	L	D	Q	A	L	K	A	A	H	P
Template Known Secondary structure		S	S	S				S			S	S	S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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