Job Description P75823 Confidence 99.96% Date Thu Jan 5 12:14:38 GMT 2012 Rank 110 Aligned Residues 328 % Identity 16% Template c2e7uA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.
Predicted Secondary structure														.	.	.	.												.																									.																							.	.	.
Query SS confidence														.	.	.	.												.																									.																							.	.	.
Query Sequence		M	I	D	L	R	S	D	T	V	T	R	P	.	.	.	.	S	R	A	M	L	E	A	M	M	A	A	.	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	.	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	.	.	.	C	E
Query Conservation														.	.	.	.												.																									.																							.	.	.
Alig confidence														.	.	.	.												.																									.																							.	.	.
Template Conservation
Template Sequence		Y	L	D	Y	V	M	S	W	G	P	L	I	L	G	H	A	H	P	K	V	L	A	R	V	R	E	T	L	E	R	G	L	T	F	G	A	P	S	P	L	E	V	A	L	A	K	K	V	K	R	A	Y	P	F	V	D	L	V	R	F	V	N	S	G	T	E	A	T	M	S	A	L	R	L	A	R	G	Y	T	G
Template Known Secondary structure					S	S	G	G	G	T	T		T	T		B	T														T		S			S	S																	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	.	.	.	.	.	.	.	.	.	.	.	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																				.
Template Sequence		R	P	Y	I	V	K	F	R	G	N	Y	H	G	H	A	D	G	L	L	V	E	A	G	S	G	A	L	T	L	G	V	P	S	S	A	G	V	P	E	E	Y	A	K	L	T	L	V	L	E	Y	N	D	P	E	G	L	R	E	V	L	K	R	R	G	E	E	.	I	A	A	I	I	F	E	P	V	V	G	N	A
Template Known Secondary structure									T	T							G	G	G	S					S	S	S			B				S	S	T	T							T	T						T	T													G	G	G	.								S	S	B		T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W
Query Conservation
Alig confidence																																		.																													.
Template Conservation																																		.																													.
Template Sequence		G	V	L	V	P	T	E	D	F	L	K	A	L	H	E	A	K	A	Y	G	V	L	L	I	A	D	E	V	M	T	G	F	.	R	L	A	F	G	G	A	T	E	L	L	G	L	K	P	D	L	V	T	L	G	K	I	L	G	G	G	L	.	P	A	A	A	Y	A	G	R	R	E	I	M	E	K	V	A	P	L
Template Known Secondary structure		S		B													G	G	G	G	T								T	T	T	T	T	.	T	S	S	T	T							T				S						G	G	G	G	T	T	S	.	S												T	T	B	T	T	T
Template Predicted Secondary structure																																		.																													.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		221	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																						.	.	.	.	.																						.	.	.	.	.
Query SS confidence										.	.	.	.																																						.	.	.	.	.																						.	.	.	.	.
Query Sequence		R	K	M	T	G	G	G	M	.	.	.	.	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	.	.	.	.	.	A	G	A	D	V	M	R	Q	D	T	N	M	L	F	V	R	V	G	E	E	N	.	.	.	.	.
Query Conservation										.	.	.	.																																						.	.	.	.	.																						.	.	.	.	.
Alig confidence										.	.	.	.																																						.	.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		G	P	V	Y	Q	A	G	T	L	S	G	N	P	L	A	M	A	A	G	L	A	T	L	E	L	L	E	E	N	P	G	Y	Y	A	Y	L	E	D	L	G	A	R	L	E	A	G	L	K	E	V	L	K	E	K	G	L	P	H	T	V	N	R	V	G	S	M	I	T	V	F	F	T	E	G	P	V	V	T	F	Q
Template Known Secondary structure		S	S	B					T	T		S																			T																								T	T									T	T						S	S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
											287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	A	S	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	R	R	T	D	T	E	L	F	K	R	F	F	H	G	L	L	D	R	G	I	Y	W	P	P	S	N	F	E	A	A	F	L	S	V	A	H	R	E	E	D	V	E	K	T	L	E	A	L	R	K	A	L
Template Known Secondary structure				T	T	S														T	T	T					S	S	S	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions