Job Description P75823 Confidence 99.97% Date Thu Jan 5 12:14:38 GMT 2012 Rank 32 Aligned Residues 322 % Identity 21% Template c2douA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n-succinyldiaminopimelate aminotransferase; PDBTitle: probable n-succinyldiaminopimelate aminotransferase (ttha0342) from2 thermus thermophilus hb8 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence												.																.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		M	I	D	L	R	S	D	T	V	T	.	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	.	.	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	.	.	.	.	.	.	.	.	.	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S
Query Conservation												.																.	.																								.	.	.	.	.	.	.	.	.
Alig confidence												.																.	.																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	D	L	S	I	G	S	T	D	L	P	P	P	E	A	P	L	K	A	L	A	E	A	L	N	D	P	T	T	Y	G	Y	C	L	K	S	C	T	L	P	F	L	E	E	A	A	R	W	Y	E	G	R	Y	G	V	G	L	D	P	R	R	E	A	L	A	L	I	G	S	Q	E	G	L	A	H	L	L	L	A
Template Known Secondary structure						S	S																			T	T		G	G	G	S	S																							S					T	T	T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	E	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y
Query Conservation
Alig confidence																				.	.	.																																			.	.	.	.
Template Conservation																				.	.	.																																			.	.	.	.
Template Sequence		L	T	E	P	E	D	L	L	L	L	P	E	V	A	Y	P	S	Y	.	.	.	F	G	A	A	R	V	A	S	L	R	T	F	L	I	P	L	R	E	D	G	L	A	D	L	K	A	V	P	E	G	V	W	R	E	.	.	.	.	A	K	V	L	L	L	N	Y	P	N	N	P	T	G	A	V	A	D	W	G	Y
Template Known Secondary structure					T	T							S	S						.	.	.							T	T								B		T	T	S	S	B		G	G	G	S								.	.	.	.								S	S		T	T	T
Template Predicted Secondary structure																				.	.	.																																			.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	.	.	.	.	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.
Template Conservation
Template Sequence		F	E	E	A	L	G	L	A	R	K	H	G	L	W	L	I	H	D	N	P	Y	V	D	Q	V	Y	E	G	E	A	P	S	P	L	A	L	P	G	A	K	E	R	V	V	E	L	F	S	L	S	K	S	Y	N	L	A	G	F	R	L	G	F	A	L	G	S	E	E	A	L	A	R	L	E	R	V	K	G	V	I
Template Known Secondary structure												T	T								T	T	G	G	G	B	S	S	S					G	G	G	S	T	T	G	G	G	T												T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																				.	.																																										.
Query SS confidence																				.	.																																										.
Query Sequence		G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	.	.	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	R	Q	D	T	N	M	L	F	V	R	V	G	.	E	E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I
Query Conservation																				.	.																																										.
Alig confidence																				.	.																																										.
Template Conservation
Template Sequence		D	F	N	Q	Y	A	G	V	L	R	M	G	V	E	A	L	K	T	P	K	E	V	V	R	G	Y	A	R	V	Y	R	E	R	A	L	G	M	A	E	A	L	K	G	V	L	S	L	L	P	P	R	A	T	M	Y	L	W	G	R	L	P	E	G	V	D	D	L	E	F	G	L	R	L	V	E	R	G	V	A	L
Template Known Secondary structure					S													T	S																								T	T	T	S							B	S	S								T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		302	.	.									.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		N	A	S	.	.	.	.	.	.	.	.	P	I	V	R	L	V	T	H	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.									.	.
Template Conservation																					.	.
Template Sequence		A	P	G	R	G	F	G	P	G	G	K	G	F	V	R	I	A	L	V	.	.	R	P	L	E	E	L	L	E	A	A	K	R	I	R	E	A	L
Template Known Secondary structure				G	G	G	G		G	G	G	T	T								.	.	S															T
Template Predicted Secondary structure																					.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions