Job Description P75823 Confidence 99.96% Date Thu Jan 5 12:14:38 GMT 2012 Rank 87 Aligned Residues 319 % Identity 19% Template c2dkjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of t.th.hb8 serine hydroxymethyltransferase Resolution 1.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.													.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		I	D	L	R	S	D	T	V	T	R	P	S	R	A	M	L	E	A	M	M	A	A	P	V	G	D	D	V	Y	G	D	D	.	.	.	.	.	.	.	.	.	.	.	.	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	.	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence					.																													.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation					.
Template Sequence		L	E	L	.	I	A	S	E	N	F	V	S	K	Q	V	R	E	A	V	G	S	V	L	T	N	K	Y	A	E	G	Y	P	G	A	R	Y	Y	G	G	C	E	V	I	D	R	V	E	S	L	A	I	E	R	A	K	A	L	F	G	A	A	W	A	N	V	Q	P	H	S	G	S	Q	A	N	M	A	V	Y	M	A
Template Known Secondary structure					.		T	T													T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S
Template Predicted Secondary structure					.
Template SS confidence
		26	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		H	C	E	R	G	E	E	Y	I	V	G	Q	A	A	H	N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	.	.	.	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P
Query Conservation																																										.	.	.
Alig confidence																																										.	.	.																.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		L	M	E	P	G	D	T	L	M	G	M	D	L	A	A	G	G	H	L	T	H	G	S	R	V	N	F	S	G	K	L	Y	K	V	V	S	Y	G	V	R	P	D	T	E	L	I	D	L	E	E	V	R	R	L	A	L	E	H	.	.	.	.	.	R	P	K	V	I	V	A	G	A	S	A	Y	P	R	F	W	D
Template Known Secondary structure					T	T								G	G	G	T			G	G	G	T		T	T	S						S									T	T	T		S														.	.	.	.	.			S							S	S			S
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A	L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	W	R	K	M	T	G
Query Conservation
Alig confidence		.	.	.																																				.	.
Template Conservation		.	.	.																																				.	.
Template Sequence		.	.	.	F	K	A	F	R	E	I	A	D	E	V	G	A	Y	L	V	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P	N	P	L	.	.	P	Y	A	H	V	V	T	S	T	T	H	K	T	L	R	G	P	R	G	G	L	I	L	S	N	D	P	E	L	G	K	R	I	D	K	L	I	F	P	G
Template Known Secondary structure		.	.	.												T								T	T	T						T	T	S	S				T	.	.	T	T		S						S	S	G	G	G				S							S													T	T	T
Template Predicted Secondary structure		.	.	.																																				.	.
Template SS confidence
					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		226	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.																																											.	.													.	.
Query SS confidence						.	.	.	.	.																																											.	.													.	.
Query Sequence		G	G	M	R	.	.	.	.	.	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	A	G	A	D	V	M	.	.	R	Q	D	T	N	M	L	F	V	R	V	G	.	.	E	E	N	A	A	A	L	G	E	Y	M	K	A
Query Conservation						.	.	.	.	.																																											.	.													.	.
Alig confidence						.	.	.	.	.																																											.	.													.	.
Template Conservation
Template Sequence		I	Q	G	G	P	L	E	H	V	I	A	G	K	A	V	A	F	F	E	A	L	Q	P	E	F	K	E	Y	S	R	L	V	V	E	N	A	K	R	L	A	E	E	L	A	R	R	G	Y	R	I	V	T	G	G	T	D	N	H	L	F	L	V	D	L	R	P	K	G	L	T	G	K	E	A	E	E	R	L	D	A
Template Known Secondary structure		T		S	S																	T	S																							T	T	T				G	G	G	S		S	S	S							G	G	G	T												T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		297	.	.	300	.	.	.	.													.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		R	N	V	L	I	N	A	S	.	.	.	.	.	.	.	.	.	.	.	.	P	I	V	R	L	V	T	H	.	.	.	.	L	D	V	S	R	E	Q	L	A	E	V	A	A	H	W	R	A	F	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		V	G	I	T	V	N	K	N	A	I	P	F	D	P	K	P	P	R	V	T	S	G	I	R	I	G	T	P	A	I	T	T	R	G	F	T	P	E	E	M	P	L	V	A	E	L	I	D	R	A	L
Template Known Secondary structure		T	T									T	T			S		T	T	T		S												T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions