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Job DescriptionP75823
Confidence99.94%DateThu Jan 5 12:14:38 GMT 2012
Rank168Aligned Residues305
% Identity22%Templatec2cb1A_
PDB info PDB header:lyaseChain: A: PDB Molecule:o-acetyl homoserine sulfhydrylase; PDBTitle: crystal structure of o-actetyl homoserine sulfhydrylase2 from thermus thermophilus hb8,oah2.
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30. ........40.........50.........60.........70.........80.
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Query Sequence  LRSDTVTRPSRAMLEAMMAAPVGDDVYG. . DDPTVNALQDYAAELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQA
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Template Sequence  YAVAAYGFKTLEEGQERFATGEG. YVYARQKDPTAKALEERLKALEGALEAVVLASGQAATFAALLALLRPGDEVVAAKG
Template Known Secondary structure 


SB


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S.
SBTTT

T
SSSTT

TT
TT
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   25....30.........40....... ..50.........60.........70.........80.........90.........100...
 
   82.......90.. .......100.........110.........120.........130.........140.........150.........160
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Query Sequence  AHNYLFEAGGA. AVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
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Template Sequence  LFGQTIGLFGQVLSLMGVTVRYVD. . . . . . PEPEAVREALSAK. . . . TRAVFVETVANPALLVPD. . . LEALATLAEEAG
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TTTTTT

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TT....SS
TTT




...T
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   104.....110.........120....... ..130.........140 .........150........ .160.........170
 
   161........170.........180.........190.........200.... .....210.........
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Query Sequence  LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVG. . SLLVGNRDYIKRAIR. . . . . . . . . . . . . . . . . . .
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Template Sequence  VALVVDNTFGAAGA. . . . . LCRPLAWGAHVVVESLTWASGHGSVLGGAVLSRETELWRNYPQFLQPWEALRARCFPERVR
Template Known Secondary structure 

GGGTTTT.....S

GGGGT
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S
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SGGGGSGGGG

GGG
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   171........180.... .....190.........200.........210.........220.........230.........240.....
 
   220.........230.........240.........250.........260.........270. ........280
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Query Sequence  WRKMTGGGMRQSGILAAAGIYALKNNVARLQEDHDNAAWMAEQLREAGADVM. . . . . . . . . . . . . . . . . . . RQDTNMLFV
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Template Sequence  TLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTL
Template Known Secondary structure  TTTT




GGGT
TT
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TTSTT
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   254.....260.........270.........280.........290.........300.........310.........320.........330...
 
   281........290.........300... ......310.........320.........
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Query Sequence  RVGEENAAALGEYMKARNVLINA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SPIVRLVTHLDVSREQLAEVAAHWRA
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Template Sequence  DLGD. . LERASRFLGAIRLLKAANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA
Template Known Secondary structure 
SS..
SS
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S
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TTTTTTTTS
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   334... ..340.........350.........360.........370.........380.........390.........400.........410.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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