Job Description P75823 Confidence 99.96% Date Thu Jan 5 12:14:38 GMT 2012 Rank 95 Aligned Residues 308 % Identity 18% Template c2c7tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamine-2-deoxy-scyllo-inosose PDBTitle: crystal structure of the plp-bound form of btrr,2 a dual functional aminotransferase involved in butirosin3 biosynthesis. Resolution 2.1 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																																															.
Query SS confidence															.	.	.	.	.	.																																															.
Query Sequence		R	P	S	R	A	M	L	E	A	M	M	A	A	.	.	.	.	.	.	P	V	G	D	D	V	Y	G	D	D	P	T	V	N	A	L	Q	D	Y	A	A	E	L	S	G	K	E	A	A	I	F	L	P	T	G	T	Q	A	N	L	V	A	L	L	S	H	.	C	E	R	G	E	E	Y	I	V	G	Q	A	A	H
Query Conservation															.	.	.	.	.	.																																															.
Alig confidence															.	.	.	.	.	.																																															.
Template Conservation
Template Sequence		Q	H	S	D	R	T	R	R	K	I	E	E	V	F	Q	S	N	R	W	A	I	S	G	Y	W	T	G	E	E	S	M	E	R	K	F	A	K	A	F	A	D	F	N	G	V	P	Y	C	V	P	T	T	S	G	S	T	A	L	M	L	A	L	E	A	L	G	I	G	E	G	D	E	V	I	V	P	S	L	T	W
Template Known Secondary structure																		T			S	T	T	S	B			S	S																T		S						S													T	T			T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		N	Y	L	F	E	A	G	G	A	A	V	L	G	S	I	Q	P	Q	P	I	D	A	A	A	D	.	G	T	L	P	L	D	K	V	A	M	K	I	K	P	D	D	I	H	F	A	R	T	K	L	L	S	L	E	N	T	H	N	G	K	V	L	P	R	E	Y	L	K	E	A	W	E	F	T	R	E	R	N	L	A
Query Conservation																											.
Alig confidence					.	.	.																				.															.	.	.	.	.	.	.																	.	.	.
Template Conservation					.	.	.																																			.	.	.	.	.	.	.																	.	.	.
Template Sequence		I	A	T	.	.	.	A	T	A	V	L	N	V	N	A	L	P	V	F	V	D	V	E	A	D	T	Y	C	I	D	P	Q	L	I	K	S	A	I	T	D	.	.	.	.	.	.	.	K	T	K	A	I	I	P	V	H	L	F	G	S	M	A	N	.	.	.	M	D	E	I	N	E	I	A	Q	E	H	N	L	F
Template Known Secondary structure		T			.	.	.							T	T								B		T	T	T		S	B											T	.	.	.	.	.	.	.	T							B			T	T					.	.	.												T
Template Predicted Secondary structure					.	.	.																																			.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		93	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	V	D	G	A	R	I	F	N	A	V	V	A	Y	G	C	E	L	K	E	I	T	Q	Y	C	D	S	F	T	I	C	L	S	K	G	L	G	T	P	V	G	S	L	L	V	G	N	R	D	Y	I	K	R	A	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		V	I	E	D	C	A	Q	S	H	G	S	V	W	N	N	Q	R	A	G	T	.	.	I	G	D	I	G	A	F	S	C	Q	Q	G	K	V	L	T	A	G	E	G	G	I	I	V	T	K	N	P	R	L	F	E	L	I	Q	Q	L	R	A	D	S	R	V	Y	C	D	D	S	S	E	L	M	H	G	D	M	Q	L
Template Known Secondary structure							T	T		T	T				T	T			T	T	S	.	.	S	S	S								T	T	S	S	S		S	S	S							S													B	T	T					S		T	T	S			T	T		B	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.								.	.	.	.	280	.	.	.						.
Predicted Secondary structure		.	.																																															.											.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence		.	.																																															.											.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		.	.	W	R	K	M	T	G	G	G	M	R	Q	S	G	I	L	A	A	A	G	I	Y	A	L	K	N	N	V	A	R	L	Q	E	D	H	D	N	A	A	W	M	A	E	Q	L	R	E	.	A	G	A	D	V	M	R	Q	D	T	.	.	.	.	.	.	.	N	M	L	F	V	R	V	G	.	.	.	.	.	E
Query Conservation		.	.																																															.											.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence		.	.																																															.											.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		V	K	K	G	D	I	Q	G	S	N	Y	C	L	S	E	F	Q	S	A	I	L	L	D	Q	L	Q	E	L	D	D	K	N	A	I	R	E	K	N	A	M	F	L	N	D	A	L	S	K	I	D	G	I	K	V	M	K	R	P	P	Q	V	S	R	Q	T	Y	Y	G	Y	V	F	R	F	D	P	V	K	F	G	G
Template Known Secondary structure						S	S				B																T	T																				T	T	S	T	T								T	T							S								G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																																															.	.	.	.	.	.	.	310	.	.	.	.	.	.		.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		E	N	A	A	A	L	G	E	Y	M	K	A	R	N	V	L	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	P	I	V	R	L	V	T	H	L	D	V	S	.	R
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		L	N	A	D	Q	F	C	E	I	L	R	E	K	L	N	M	G	T	F	Y	L	H	P	P	Y	L	P	V	H	K	N	P	L	F	C	P	W	T	K	N	R	Y	L	K	S	V	R	K	T	E	A	Y	W	R	G	L	H	Y	P	V	S	E	R	A	S	G	Q	S	I	V	I	H	H	A	I	L	L	A	E	P
Template Known Secondary structure																T			T	T	T								G	G	G		T	T			G	G	G		T	T	S													T										T	T	S						G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	A	E	V	A	A	H	W	R	A	F	L	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	L	S	L	L	V	D	A	V	A	E	L	A	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions