Job Description P29012 Confidence 99.87% Date Thu Jan 5 11:45:32 GMT 2012 Rank 48 Aligned Residues 202 % Identity 13% Template d1twia2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.00

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.
Predicted Secondary structure																			.																												.	.																								.
Query SS confidence																			.																												.	.																								.
Query Sequence		A	S	L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	.	A	A	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	.	G	P	I	L	M	L	E	G	F
Query Conservation																			.																												.	.																								.
Alig confidence																			.																.	.	.	.									.	.				.																				.
Template Conservation																																			.	.	.	.														.
Template Sequence		I	K	I	N	Y	N	R	Y	I	E	A	F	K	R	W	E	E	E	T	G	K	E	F	I	V	A	Y	A	Y	K	A	N	A	.	.	.	.	N	L	A	I	T	R	L	L	A	K	L	G	C	.	G	A	D	V	V	S	G	G	E	L	Y	I	A	K	L	S	N	V	P	S	K	K	I	V	F	N	G	N	C
Template Known Secondary structure																					S									G	G	G			.	.	.	.											T	T		.						S										T	T			G	G	G						S	S
Template Predicted Secondary structure																																			.	.	.	.														.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.															130	.	.	.	.	.	.	.			.	.	140	.	.	.
Predicted Secondary structure																.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		F	H	A	Q	D	L	E	I	Y	D	Q	H	R	L	.	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	.	.	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	F	Q	P	D	R	.	.	V	L	T	V	W	Q
Query Conservation																.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence																.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		K	T	K	E	E	I	I	M	G	I	E	A	N	I	R	A	F	N	V	D	S	I	S	E	L	I	L	I	N	E	T	A	K	E	L	G	E	T	A	N	V	A	F	R	I	N	P	N	V	N	P	K	T	H	P	K	I	S	T	G	L	K	K	N	K	F	G	L	D	V	E	S	G	I	A	M	K	A	I	K
Template Known Secondary structure													T	T		S						S															T															T	T	T											S	S		S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		Q	L	R	A	M	A	N	V	G	E	M	T	L	M	S	H	F	A	E	A	.	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P	S	G	Q	W	R
Query Conservation																						.
Alig confidence																						.																								.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		M	A	L	E	M	E	Y	V	N	V	V	G	V	H	C	H	I	G	S	Q	L	T	D	I	S	P	F	I	E	E	T	R	K	V	M	D	F	V	V	E	L	K	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	E	I	E	D	V	N	L	G	.	.	.	.	G	G	L	G	I	P	Y	Y	K
Template Known Secondary structure							S	S												S	S	B			S																				T	.	.	.	.	.	.	.	.	.	.	.	.	.	T				S						.	.	.	.			B				S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.														.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.
		223	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	A	N	T	G	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	Q	I	P	T	Q	K
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions