Job Description P29012 Confidence 99.88% Date Thu Jan 5 11:45:32 GMT 2012 Rank 45 Aligned Residues 204 % Identity 14% Template d1hkva2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.6

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																			.																									.	.																								.
Query SS confidence																			.																									.	.																								.
Query Sequence		D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	T	.	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	.	G	P	I	L	M	L	E	G	F	F	H	A
Query Conservation																			.																									.	.																								.
Alig confidence																			.													.	.	.	.									.	.				.																				.
Template Conservation																																.	.	.	.														.
Template Sequence		D	E	D	D	F	R	S	R	C	R	E	T	A	A	A	F	G	S	G	A	N	V	H	Y	A	A	K	A	F	L	.	.	.	.	C	S	E	V	A	R	W	I	S	E	E	G	L	.	C	L	D	V	C	T	G	G	E	L	A	V	A	L	H	A	S	F	P	P	E	R	I	T	L	H	G	N	N	K	S	V
Template Known Secondary structure																	T	T	S	G	G	G	B				G	G	G	S		.	.	.	.												T		.						S										T	T			G	G	G						S	S
Template Predicted Secondary structure																																.	.	.	.														.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		86	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.															130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.
Predicted Secondary structure													.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence													.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		Q	D	L	E	I	Y	D	Q	H	R	L	.	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	.	.	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	F	Q	P	D	R	V	L	T	V	.	.	W	Q	Q	L	R
Query Conservation													.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence													.																	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		S	E	L	T	A	A	V	K	A	G	V	G	H	I	V	V	D	S	M	T	E	I	E	R	L	D	A	I	A	G	E	A	G	I	V	Q	D	V	L	V	R	L	T	V	G	V	E	A	H	T	H	E	F	I	S	T	A	H	E	D	Q	K	F	G	L	S	V	A	S	G	A	A	M	A	A	V	R	R	V	F
Template Known Secondary structure											T								S															T												S						T						S	S			S	S	S	S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	M	A	N	V	G	E	M	T	L	M	S	H	F	A	E	A	.	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P	S	G	Q	W	R	D	I	A
Query Conservation																			.
Alig confidence																			.																								.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		A	T	D	H	L	R	L	V	G	L	H	S	H	I	G	S	Q	I	F	D	V	D	G	F	E	L	A	A	H	R	V	I	G	L	L	R	D	V	V	G	E	.	.	.	.	.	.	.	.	F	G	P	E	K	T	A	Q	I	A	T	V	D	L	G	.	.	.	.	G	G	L	G	I	S	Y	L	P	S	D	D
Template Known Secondary structure				S	S																	S																					.	.	.	.	.	.	.	.						S	T	T								.	.	.	.			B				S	S	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.
		226	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	G	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	P	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions