Job Description P29012 Confidence 99.92% Date Thu Jan 5 11:45:32 GMT 2012 Rank 43 Aligned Residues 189 % Identity 13% Template d1f3ta2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																											.	.																								.
Query SS confidence																																											.	.																								.
Query Sequence		D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	.	G	P	I	L	M	L	E	G	F	F	H	A	Q
Query Conservation																																											.	.																								.
Alig confidence																															.	.	.	.									.	.				.																				.
Template Conservation																															.	.	.	.														.
Template Sequence		D	L	G	D	I	V	R	K	H	E	T	W	K	K	C	L	P	R	V	T	P	F	Y	A	V	K	C	N	D	.	.	.	.	D	W	R	V	L	G	T	L	A	A	L	G	T	.	G	F	D	C	A	S	N	T	E	I	Q	R	V	R	G	I	G	V	P	P	E	K	I	I	Y	A	N	P	C	K	Q	I	S
Template Known Secondary structure																		T	T							G	G	G			.	.	.	.											T	T		.						S										T	T			G	G	G						S	S
Template Predicted Secondary structure																															.	.	.	.														.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.
Predicted Secondary structure												.																																																																				.
Query SS confidence												.																																																																				.
Query Sequence		D	L	E	I	Y	D	Q	H	R	L	.	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	R	L	G	F	Q	P	D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	E	M	T	L	M	S	H	F	A	E	A	.	E
Query Conservation												.																																																																				.
Alig confidence												.																				.	.	.	.																														.															.
Template Conservation																																.	.	.	.																														.
Template Sequence		H	I	R	Y	A	R	D	S	G	V	D	V	M	T	F	D	C	V	D	E	L	E	K	V	A	K	T	H	P	K	.	.	.	.	A	K	M	V	L	R	I	S	T	V	K	F	G	A	K	V	E	D	C	R	F	I	L	E	Q	A	K	K	L	.	N	I	D	V	T	G	V	S	F	H	V	G	S	G	S	T
Template Known Secondary structure									T	T								S												T	T	.	.	.	.							B					S		B															T	.	T												S			S
Template Predicted Secondary structure																																.	.	.	.																														.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P	S	G	Q	W	R	D	I	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		D	A	S	T	F	A	Q	A	I	S	D	S	R	F	V	F	D	M	G	T	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	N	M	H	I	L	D	I	G	.	.	.	.	G	G	F	P	G	T	R	D	A	P	L	K
Template Known Secondary structure			T																				T	.	.	.	.	.	.	.	.	.	.	.	.	.	T										.	.	.	.					S	S	T	T	S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.														.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions