Job Description P29012 Confidence 99.88% Date Thu Jan 5 11:45:32 GMT 2012 Rank 47 Aligned Residues 192 % Identity 13% Template d1d7ka2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.10

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.
Predicted Secondary structure																																											.	.																																	.
Query SS confidence																																											.	.																																	.
Query Sequence		D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	G	P	I	L	M	L	E	G	F	.	F	H	A	Q
Query Conservation																																											.	.																																	.
Alig confidence																										.					.	.	.	.									.	.				.																													.
Template Conservation																										.					.	.	.	.														.
Template Sequence		D	L	G	D	I	L	K	K	H	L	R	W	L	K	A	L	P	R	V	T	P	F	Y	A	.	V	C	N	D	.	.	.	.	S	K	A	I	V	K	T	L	A	A	T	G	T	.	G	F	D	C	A	S	K	T	E	I	Q	L	V	Q	S	L	G	V	P	P	E	R	I	I	Y	A	N	P	C	K	Q	V	S
Template Known Secondary structure																		T	T							.					.	.	.	.												T		.						S									T	T	T			G	G	G						S	S
Template Predicted Secondary structure																										.					.	.	.	.														.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																.	.	.	.	.	.
Query SS confidence												.																																.	.	.	.	.	.
Query Sequence		D	L	E	I	Y	D	Q	H	R	L	.	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	.	.	.	.	.	.	M	N	R	L	G	F	Q	P	D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	E	M	T	L	M	S	H
Query Conservation												.																																.	.	.	.	.	.
Alig confidence												.																																.	.	.	.	.	.																					.
Template Conservation																																																																						.
Template Sequence		Q	I	K	Y	A	A	N	N	G	V	Q	M	M	T	F	D	S	E	V	E	L	M	K	V	A	R	A	H	P	K	A	K	L	V	L	R	I	A	T	D	D	S	K	A	V	C	R	L	S	V	K	F	G	A	T	L	R	T	S	R	L	L	L	E	R	A	K	E	.	L	N	I	D	V	V	G	V	S	F	H
Template Known Secondary structure									T	T								S												T	T							B							S				S			S	S		B															.	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.
		160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		F	A	E	A	.	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P	S	G	Q	W	R	D	I	A
Query Conservation						.
Alig confidence						.																								.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		V	G	S	G	C	T	D	P	E	T	F	V	Q	A	I	S	D	A	R	C	V	F	D	M	G	A	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	M	Y	L	L	D	I	G	.	.	.	.	G	G	F	P	G	S	E	D	V	K	L	K
Template Known Secondary structure				T	T		S		T																					.	.	.	.	.	.	.	.	.	.	.	.	.	T										.	.	.	.					S	S	S		S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.														.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions