Job Description P29012 Confidence 100.00% Date Thu Jan 5 11:45:32 GMT 2012 Rank 16 Aligned Residues 223 % Identity 30% Template d1bd0a2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.60

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																				.																									.	.
Query SS confidence																				.																									.	.
Query Sequence		L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	T	.	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	G	P	I	L	M	L	E	G	F	F	H	A
Query Conservation																				.																									.	.
Alig confidence																				.																									.	.
Template Conservation
Template Sequence		V	D	L	D	A	I	Y	D	N	V	E	N	L	R	R	L	L	P	D	D	T	H	I	M	A	V	V	K	A	N	A	Y	G	H	G	D	V	Q	V	A	R	T	A	L	E	A	G	A	S	R	L	A	V	A	F	L	D	E	A	L	A	L	R	E	K	G	I	E	A	P	I	L	V	L	G	A	S	R	P	A
Template Known Secondary structure																		S		T	T													T	T													T							S	S										T	T			S						S				G	G
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																													.																							.
Query SS confidence																													.																							.
Query Sequence		Q	D	L	E	I	Y	D	Q	H	R	L	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	.	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	R	L	G	F	Q	.	P	D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	E	M	T	L	M	S	H	F	A	E	A
Query Conservation																													.																							.
Alig confidence			.																										.																							.
Template Conservation			.
Template Sequence		D	.	A	A	L	A	A	Q	Q	R	I	A	L	T	V	F	R	S	D	W	L	E	E	A	S	A	L	Y	S	G	P	F	P	I	H	F	H	L	K	M	D	T	G	M	G	R	L	G	V	K	D	E	E	E	T	K	R	I	V	A	L	I	E	R	H	P	H	F	V	L	E	G	L	Y	T	H	F	A	T	A
Template Known Secondary structure		G	.							T	T																					S	S								B		S	S	S		S	S	S	B		S														S	T	T											S	S	T
Template Predicted Secondary structure			.
Template SS confidence
		92		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		164	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure						.	.																		.	.	.
Query SS confidence						.	.																		.	.	.
Query Sequence		E	H	P	D	.	.	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	.	.	.	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P	S	G	Q	W	R	D	I	A	N	T	G	L	R	P	V
Query Conservation						.	.																		.	.	.
Alig confidence						.	.																		.	.	.
Template Conservation
Template Sequence		D	E	V	N	T	D	Y	F	S	Y	Q	Y	T	R	F	L	H	M	L	E	W	L	P	S	R	P	P	L	V	H	C	A	N	S	A	A	S	L	R	F	P	D	R	T	F	N	M	V	R	F	G	I	A	M	Y	G	L	A	P	S	P	G	I	K	P	L	L	P	Y	P	L	K	E	A
Template Known Secondary structure		T	S	S																	T	T		S	S			S														T	T	S		T	T						G	G	G	G	T			S		G	G	G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions