Job Description P29012 Confidence 100.00% Date Thu Jan 5 11:45:32 GMT 2012 Rank 28 Aligned Residues 200 % Identity 19% Template c3r79B_ PDB info PDB header:structure genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharactertized protein from agrobacterium2 tumefaciens Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																		.	.	.	.																										.																	.	.	.	.
Query SS confidence																		.	.	.	.																										.																	.	.	.	.
Query Sequence		D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	.	.	.	.	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	.	.	.	.	L	R	E	R	G	W	K	G	P	I	L	M	L	E
Query Conservation																		.	.	.	.																										.																	.	.	.	.
Alig confidence																		.	.	.	.											.	.	.	.												.																	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		R	L	E	D	V	R	Q	R	I	A	D	V	A	E	K	S	G	R	K	A	A	D	V	A	L	V	A	V	S	K	.	.	.	.	T	F	D	A	E	A	I	Q	P	V	I	D	A	G	Q	R	V	F	G	E	N	R	V	Q	E	A	Q	G	K	W	P	A	L	K	E	K	T	S	D	I	E	L	H	L	I	G
Template Known Secondary structure																	T	T			G	G	G								T	.	.	.	.	T												T	T							S																	T	T							S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		G	F	F	H	A	Q	D	L	E	I	Y	D	Q	H	R	L	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	.	.	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	R	L	G	F	Q	P	D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	E	M	T	L	M	S
Query Conservation																																		.	.
Alig confidence																																		.	.
Template Conservation
Template Sequence		P	L	Q	S	N	K	A	A	D	A	V	A	L	F	D	V	V	E	S	I	D	R	E	K	I	A	R	A	L	S	E	E	C	A	R	Q	G	R	S	L	R	F	Y	V	Q	V	N	T	G	L	Q	K	A	G	I	D	P	R	E	T	V	A	F	V	A	F	C	R	D	E	L	K	L	P	V	E	G	L	X	C
Template Known Secondary structure					G	G	G									S							S															T									B		T	T					S	B															T	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		H	F	A	E	A	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	C	R	R	.	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P
Query Conservation																															.
Alig confidence									.	.	.	.																			.
Template Conservation									.	.	.	.
Template Sequence		I	P	P	A	E	N	P	.	.	.	.	G	P	H	F	A	L	L	A	K	L	A	G	Q	C	G	L	E	K	L	S	X	G	X	S	G	D	F	E	T	A	V	E	F	G	A	T	S	V	R	V	G	S	A	I	F	G	S	R	A
Template Known Secondary structure								S	.	.	.	.															T									T	T	T							T	T		S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions