Job Description P29012 Confidence 99.75% Date Thu Jan 5 11:45:32 GMT 2012 Rank 50 Aligned Residues 203 % Identity 15% Template c3nzqB_ PDB info PDB header:lyase Chain: B: PDB Molecule:biosynthetic arginine decarboxylase; PDBTitle: crystal structure of biosynthetic arginine decarboxylase adc (spea)2 from escherichia coli, northeast structural genomics consortium3 target er600 Resolution 3.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.											.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																										.	.					.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.																										.	.					.
Query Sequence		P	I	Q	A	S	L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	.	.	.	.	.	.	.	.	.	.	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	.	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R
Query Conservation																								.	.	.	.	.	.	.	.	.	.																										.	.					.
Alig confidence				.																				.	.	.	.	.	.	.	.	.	.														.	.	.	.									.	.					.
Template Conservation				.																																											.	.	.	.
Template Sequence		P	A	.	L	F	C	F	P	Q	I	L	Q	H	R	L	R	S	I	N	A	A	F	K	R	A	R	E	S	Y	G	Y	N	G	D	Y	F	L	V	Y	P	I	K	V	N	Q	.	.	.	.	H	R	R	V	I	E	S	L	I	H	S	G	E	P	L	G	L	E	A	G	S	K	A	E	L	M	A	V	L	A	H
Template Known Secondary structure		S		.																											T			S								G	G	G			.	.	.	.										T	S	S	S							S	S
Template Predicted Secondary structure				.																																											.	.	.	.
Template SS confidence
		87	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		71	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.														.
Predicted Secondary structure					.																				.	.	.	.	.																					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																				.	.	.	.	.																					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	W	K	.	G	P	I	L	M	L	E	G	F	F	H	A	Q	D	L	E	I	Y	D	.	.	.	.	.	Q	H	R	L	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	.	.	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Query Conservation					.																				.	.	.	.	.																					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																				.	.	.	.	.																					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	M	T	R	S	V	I	V	C	N	G	Y	K	D	R	E	Y	I	R	L	A	L	I	G	E	K	M	G	H	K	V	Y	L	V	I	E	K	M	S	E	I	A	I	V	L	D	E	A	E	R	L	N	V	V	P	R	L	G	V	R	A	R	L	A	S	Q	G	S	G	K	W	Q	S	S	G	G	E	K	S
Template Known Secondary structure			T	T	S								S																T	T									S														T	T									B			S	S	S		S	S	T	T		S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																									.												.
Query SS confidence																									.												.
Query Sequence		R	L	G	F	Q	P	D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	.	E	M	T	L	M	S	H	F	A	E	A	.	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R
Query Conservation																									.												.
Alig confidence																									.												.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	F	G	L	A	A	T	Q	V	L	Q	L	V	E	T	L	R	E	A	G	R	L	D	S	L	Q	L	L	H	F	H	L	G	S	Q	M	A	N	I	R	D	I	A	T	G	V	R	E	S	A	R	F	Y	V	E	L	H	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	N	I	Q	C	F	D
Template Known Secondary structure			S		B															T	T		T	T	T										S	S																							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300														.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	I	I	L	Y	G	A	S	P	S	G	Q	W	R	D	I	A	N	T	G
Query Conservation
Alig confidence				.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		V	G	.	.	.	.	G	G	L	G	V	D	Y	E	G	T	R	S	Q	S	D
Template Known Secondary structure				.	.	.	.	S						S	S	S	S		S	S	S	T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		309	310					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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