Job Description P29012 Confidence 99.74% Date Thu Jan 5 11:45:32 GMT 2012 Rank 51 Aligned Residues 175 % Identity 14% Template c3nzpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:arginine decarboxylase; PDBTitle: crystal structure of the biosynthetic arginine decarboxylase spea from2 campylobacter jejuni, northeast structural genomics consortium target3 br53 Resolution 3.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.											.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																										.	.					.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.																										.	.					.	.	.
Query Sequence		P	I	Q	A	S	L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	.	.	.	.	.	.	.	.	.	.	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	.	.	.	G	F	A	L	L	N	L	E	E	A	I	T	L	R
Query Conservation																								.	.	.	.	.	.	.	.	.	.																										.	.					.	.	.
Alig confidence				.																				.	.	.	.	.	.	.	.	.	.														.	.	.	.									.	.					.	.	.
Template Conservation				.																																											.	.	.	.
Template Sequence		P	L	.	L	L	R	F	P	H	L	I	Q	K	Q	I	E	N	I	Y	G	N	F	N	K	A	R	K	E	F	G	Y	K	G	G	F	N	A	V	Y	P	L	K	V	N	Q	.	.	.	.	Y	P	G	F	V	K	N	L	V	K	L	G	K	D	Y	N	Y	G	L	E	A	G	S	K	A	E	L	L	L	A	X
Template Known Secondary structure				.																										T	T			S								G	G	G			.	.	.	.												T	G	G	G	T							S
Template Predicted Secondary structure				.																																											.	.	.	.
Template SS confidence
		46	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																											.	.	.	.	.																					.	.	.
Query SS confidence																											.	.	.	.	.																					.	.	.
Query Sequence		E	R	G	W	K	G	P	I	L	M	L	E	G	F	F	H	A	Q	D	L	E	I	Y	D	Q	.	.	.	.	.	H	R	L	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	R	.	.	.	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	R	L	G	F	Q	P	D	R	V	L	T
Query Conservation																											.	.	.	.	.																					.	.	.
Alig confidence																											.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		A	Y	N	N	E	G	A	P	I	T	V	N	G	F	K	D	R	E	L	I	N	I	G	F	I	A	A	E	X	G	H	N	I	T	L	T	I	E	G	L	N	E	L	E	A	I	I	D	I	A	K	E	R	F	K	P	K	P	N	I	G	L	R	V	R	L	H	S	A	K	F	G	L	T	S	T	E	L	I	E
Template Known Secondary structure				S		T	T	S						S																T	T								S	S												T	T	S		S									B			T	T				S	B
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		141	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure													.													.
Query SS confidence													.													.
Query Sequence		V	W	Q	Q	L	R	A	M	A	N	V	.	G	E	M	T	L	M	S	H	F	A	E	A	.	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L
Query Conservation													.													.
Alig confidence													.													.
Template Conservation
Template Sequence		A	V	N	L	L	K	E	N	K	L	L	E	Q	F	T	X	I	H	F	H	L	G	S	Q	I	T	E	I	H	P	L	K	K	A	L	N	E	A	G	N	I	Y	T	E	L
Template Known Secondary structure									T	T		T	T	T										S		B			S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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