Job Description P29012 Confidence 99.94% Date Thu Jan 5 11:45:32 GMT 2012 Rank 41 Aligned Residues 291 % Identity 14% Template c3n29A_ PDB info PDB header:lyase Chain: A: PDB Molecule:carboxynorspermidine decarboxylase; PDBTitle: crystal structure of carboxynorspermidine decarboxylase complexed with2 norspermidine from campylobacter jejuni Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																									.	.
Query SS confidence																									.	.																									.	.
Query Sequence		P	I	Q	A	S	L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	T	.	.	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	G	P	I	L	M	L
Query Conservation																									.	.																									.	.
Alig confidence						.																			.	.													.	.	.	.									.	.				.											.
Template Conservation						.																																	.	.	.	.														.											.
Template Sequence		P	A	Y	I	.	L	E	E	D	K	L	R	K	N	C	E	L	L	A	S	V	G	E	K	S	G	A	K	V	L	L	A	L	K	G	F	A	.	.	.	.	F	S	G	A	M	K	I	V	G	E	Y	L	K	.	G	C	T	C	S	G	L	W	E	A	.	K	F	A	K	E	Y	M	D	K	E	I	H	T	Y
Template Known Secondary structure		S				.																												T	T	T			.	.	.	.		G	G	G								S		.					S	S					.							T		S
Template Predicted Secondary structure						.																																	.	.	.	.														.											.
Template SS confidence
		9	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		E	G	F	F	H	A	Q	D	L	E	I	Y	D	Q	H	R	L	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	.	.	M	N	R	L	G	F	Q	P	D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	E	M	T	L	M
Query Conservation																																																		.	.
Alig confidence																																																		.	.												.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		S	P	A	F	K	E	D	E	I	G	E	I	A	S	L	S	H	H	I	V	F	N	S	L	A	Q	F	H	K	F	Q	S	K	T	Q	K	N	S	L	G	L	R	C	N	V	E	F	S	G	R	Y	S	R	L	G	I	R	A	K	D	F	.	.	.	.	.	.	.	E	N	V	D	L	N	A	I	E	G	L	H
Template Known Secondary structure			S	S														S					S	S								G	G	G		T	T	S						B							T	T			S	S	B		G	G	G	G	.	.	.	.	.	.	.	T	T				T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		S	H	F	A	E	A	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P	S	G	Q	W	R	D	I	A	N	T	G	.	.	.	L	R	P	V	M	T
Query Conservation																																																																									.	.	.
Alig confidence																																																																									.	.	.
Template Conservation
Template Sequence		F	H	A	L	C	E	E	S	A	D	A	L	E	A	V	L	K	V	F	E	E	K	F	G	K	W	I	G	Q	M	K	W	V	N	F	G	G	G	H	H	I	T	K	K	G	Y	D	V	E	K	L	I	A	L	C	K	N	F	S	D	K	Y	G	V	Q	V	Y	L	E	P	G	E	A	V	G	W	Q	T	G	N
Template Known Secondary structure						S	S	B																	G	G	G	T	T	T		S						S		B		T	T	S	T	T																		T								S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	S	E	I	I	G	V	Q	T	L	K	A	G	E	R	V	G	Y	G	G	R	Y	T	A	R	D	E	Q	R	I	G	I	V	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	D	G	Y	P	R	H	A	P	T	G	T	P	V	L	V	D	G	V	R	T	M	T
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	A	S	V	V	D	I	I	E	N	E	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	I	L	D	T	S	S	E	A	H	M	P	D	T	I	I	M	P	Y	T	S	E	V	L	N	A	R	I	L	A	T	R	E	N	E	K	I	S	D	L	K	E	N	E	F	A	Y	L	L
Template Known Secondary structure												S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S						S						T	T					B	T	T							T	T			B						T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.																	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	G	T	V	S	M	D	M	.	L	A	V	D	L	T	P	C	P	Q	A	G	I	G	T	P	V	E	L	W	G
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		T	G	N	T	C	L	A	G	D	V	M	G	E	Y	A	F	D	K	K	L	K	I	G	D	K	I	V	F	L	D
Template Known Secondary structure				S	S	S		T	T									S	S				T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions