Job Description P29012 Confidence 99.88% Date Thu Jan 5 11:45:32 GMT 2012 Rank 46 Aligned Residues 288 % Identity 14% Template c3mt1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative carboxynorspermidine decarboxylase protein; PDBTitle: crystal structure of putative carboxynorspermidine decarboxylase2 protein from sinorhizobium meliloti Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																									.
Query SS confidence																												.	.																									.
Query Sequence		M	T	R	P	I	Q	A	S	L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	T	.	.	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	G	P	I	L
Query Conservation																												.	.																									.
Alig confidence									.																			.	.													.	.	.	.									.																						.
Template Conservation									.																																	.	.	.	.																															.
Template Sequence		I	E	T	P	Y	Y	L	.	I	D	K	A	K	L	T	R	N	X	E	R	I	A	H	V	R	E	K	S	G	A	K	A	L	L	A	L	K	C	F	A	.	.	.	.	T	W	S	V	F	D	L	X	R	D	Y	X	D	G	T	T	S	S	S	L	F	E	V	R	L	G	R	E	R	F	.	G	K	E	T	H
Template Known Secondary structure				S	S				.																												T	T	T			.	.	.	.		G	G	G						T	T							S	S											T	.		S
Template Predicted Secondary structure									.																																	.	.	.	.																															.
Template SS confidence
		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	G	F	F	H	A	Q	D	L	E	I	Y	D	Q	H	R	L	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	R	L	G	F	Q	P	D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	E	M	T	L	M
Query Conservation
Alig confidence																																									.	.								.	.														.	.	.	.	.	.	.
Template Conservation																																									.	.								.	.														.	.	.	.	.	.	.
Template Sequence		A	Y	S	V	A	Y	G	D	N	E	I	D	E	V	V	S	H	A	D	K	I	I	F	N	S	I	S	Q	L	E	R	F	A	D	K	A	A	G	I	.	.	A	R	G	L	R	L	N	.	.	P	Q	R	L	G	E	W	D	V	P	K	V	E	.	.	.	.	.	.	.	R	V	X	D	R	I	N	G	F	X
Template Known Secondary structure					S	S														S					S	S								T	T	T	T	T	T	S	.	.						B		.	.					S	B								.	.	.	.	.	.	.	T	T	T	T	S
Template Predicted Secondary structure																																									.	.								.	.														.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.
		158	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.
Predicted Secondary structure								.																																																																		.	.	.
Query SS confidence								.																																																																		.	.	.
Query Sequence		S	H	F	A	E	A	.	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P	S	G	Q	W	R	D	I	A	N	T	G	.	.	.	L	R	P	V	M
Query Conservation								.																																																																		.	.	.
Alig confidence								.																																																																		.	.	.
Template Conservation
Template Sequence		I	H	N	N	C	E	N	K	D	F	G	L	F	D	R	X	L	G	E	I	E	E	R	F	G	A	L	I	A	R	V	D	W	V	S	L	G	G	G	I	H	F	T	G	D	D	Y	P	V	D	A	F	S	A	R	L	R	A	F	S	D	R	Y	G	V	Q	I	Y	L	E	P	G	E	A	S	I	T	K	S	T
Template Known Secondary structure						S	S	B																								S	S						S		B		T	T	S	T	T																		T								S					T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.																.
Query SS confidence																																																									.	.	.	.																.
Query Sequence		T	L	S	S	E	I	I	G	V	Q	T	L	K	A	G	E	R	V	G	Y	G	G	R	Y	T	A	R	D	E	Q	R	I	G	I	V	A	A	G	Y	A	D	G	Y	P	R	H	A	P	T	G	T	P	V	L	V	.	.	.	.	D	G	V	R	T	M	T	V	G	T	V	S	M	D	M	.	L	A	V	D	L
Query Conservation																																																									.	.	.	.																.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.																.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	E	V	T	V	L	D	T	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	N	L	A	I	V	D	S	S	I	E	A	H	X	L	D	L	L	I	Y	R	E	T	A	K	V	L	P	N	E	G	S	H	S	Y	X	I	C	G	K	S	C	L	A	G	D	V	F	G	E	F
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S														T						S	S			S	S								S	S	S		T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.																		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	C	P	Q	A	G	I	G	T	P	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	A	E	E	L	K	V	G	D	R	I	S	F
Template Known Secondary structure				S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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