Job Description P29012 Confidence 100.00% Date Thu Jan 5 11:45:32 GMT 2012 Rank 33 Aligned Residues 202 % Identity 17% Template c3cpgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an unknown protein from bifidobacterium2 adolescentis Resolution 1.71 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.												.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																										.																						.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.																										.																						.	.	.	.
Query Sequence		S	L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	.	.	.	.	.	.	.	.	.	.	.	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.																										.																						.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.											.	.	.	.												.																						.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		D	A	R	A	R	E	I	T	D	G	V	H	R	V	L	D	R	I	A	A	A	E	E	Q	A	G	R	E	A	G	S	V	R	L	L	A	A	T	K	.	.	.	.	T	R	D	I	G	E	I	X	A	A	I	D	A	G	V	R	X	I	G	E	N	R	P	Q	E	V	T	A	K	A	E	G	L	A	R	R	C
Template Known Secondary structure																										T	T			T	T	S	S							T	.	.	.	.	T												T	T							S
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
														72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																										.	.															.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																										.	.															.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	W	K	G	P	I	L	M	L	E	G	F	F	H	A	Q	D	L	E	I	Y	D	Q	H	R	L	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	.	.	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	.	.	G	M	N	R	L	G	F	Q	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																										.	.															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																										.	.															.	.
Template Conservation
Template Sequence		A	E	R	G	F	S	L	G	V	A	A	A	E	H	I	P	F	H	L	I	G	Q	L	Q	S	N	K	I	G	K	V	L	P	V	V	D	T	I	E	S	V	D	S	I	D	L	A	E	K	I	S	R	R	A	V	A	R	G	I	T	V	G	V	L	L	E	V	N	E	S	G	E	E	S	K	S	G	C	D	P
Template Known Secondary structure				T	T																	S				G	G	G					T	T	T		S																						T									B			S	S		T	T	S	S	S	B		G
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	E	M	T	L	M	S	H	F	A	E	A	E	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	G	L	E	.	.	.	.	.	.	.	.	.	.	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	A	I	R	I	A	Q	K	I	G	T	L	D	G	I	E	L	Q	G	L	X	T	I	G	A	H	V	H	D	E	T	V	I	R	R	G	F	S	H	L	R	K	T	R	D	L	I	L	A	S	G	E	P	G	T	D	R	C	R	E	L	S	X	G	X	T	G	D	X	E	L	A	I	A	E	G	S	T	I
Template Known Secondary structure		G	G										T		T	T													S	S																									T	T		T	T									T	T	T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		206	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	P	G	I	I	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	V	G	T	A	I	F
Template Known Secondary structure					S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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