Job Description P29012 Confidence 99.96% Date Thu Jan 5 11:45:32 GMT 2012 Rank 40 Aligned Residues 277 % Identity 14% Template c3btnA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:antizyme inhibitor 1; PDBTitle: crystal structure of antizyme inhibitor, an ornithine2 decarboxylase homologous protein Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80
Predicted Secondary structure																																																	.	.																								.
Query SS confidence																																																	.	.																								.
Query Sequence		P	I	Q	A	S	L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	.	G	P	I	L	M	L	E
Query Conservation																																																	.	.																								.
Alig confidence						.																															.	.	.	.									.	.				.																				.
Template Conservation						.																															.	.	.	.														.
Template Sequence		A	F	F	V	.	G	D	L	G	K	I	V	K	K	H	S	Q	W	Q	T	V	V	A	Q	I	K	P	F	Y	T	V	K	C	N	S	.	.	.	.	T	P	A	V	L	E	I	L	A	A	L	G	T	.	G	F	A	C	S	S	K	N	E	M	A	L	V	Q	E	L	G	V	S	P	E	N	I	I	F	T	S
Template Known Secondary structure						.																		T	T							G	G	G			.	.	.	.												T		.					S	S										T	T			G	G	G
Template Predicted Secondary structure						.																															.	.	.	.														.
Template SS confidence
		39	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	F	F	H	A	Q	D	L	E	I	Y	D	Q	H	R	L	.	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	R	L	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	R	L	G	F	Q	P	D	R	V	L	T	V	W	Q	Q	L	R	A	M	A	N	V	G	E	M	T	L	M	S	H
Query Conservation																		.
Alig confidence																		.																					.	.																														.
Template Conservation																																							.	.																														.
Template Sequence		P	C	K	Q	V	S	Q	I	K	Y	A	A	K	V	G	V	N	I	M	T	C	D	N	E	I	E	L	K	K	I	A	R	N	H	P	N	A	.	.	K	V	L	L	H	I	A	T	E	D	M	K	F	G	T	T	L	K	N	C	R	H	L	L	E	C	A	K	E	.	L	D	V	Q	I	I	G	V	K	F	H
Template Known Secondary structure		S	S													T								S												T	T		.	.						B									B															.		T
Template Predicted Secondary structure																																							.	.																														.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.
		160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																							.	.	.	.	.	210	.	.	.
Predicted Secondary structure							.																	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	E	A	E	.	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	.	.	.	E	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	R	P	G	I	I	L	Y
Query Conservation							.																	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	S	A	C	K	E	Y	Q	V	Y	V	H	A	L	S	D	A	R	C	V	F	D	M	A	G	E	F	G	F	T	M	N	M	L	D	I	G	G	G	F	T	G	T	E	I	Q	L	E	E	V	N	H	V	I	S	P	L	L	D	I	Y	F	P	E	G	S	G	I	Q	I	I	S	E	P	G	S	Y	Y	V
Template Known Secondary structure				T	T				T	T																			T	T										S				S																				S		T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	S	P	S	G	Q	W	R	D	I	A	N	T	G	L	R	P	V	M	T	L	S	S	E	I	I	G	V	Q	T	L	K	A	G	E	R	V	G	Y	G	G	R	Y	T	A	R	D	E	Q	R	I	G	I	V	A	A	G	Y	A	D	G	Y	P	R	H	A	P	T	G	T	P	V	L	V	D	G	V	R	T
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	F	T	L	A	V	N	I	I	A	K	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	F	V	Y	Y	M	N	D	G	V	Y	G	S	F	A	S	K	L	S	T	I	P	E	V	H	K	K	P	L	F	T	S
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S			T	T	T	T	T	G	G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278																	.	280	.	.	.	.	.	.	.	.	.	290	.	.																	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		294	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		M	T	V	G	T	V	S	M	.	.	D	M	L	A	V	D	L	T	P	C	P	Q	A	G	I	G	T	P	V	E	L
Query Conservation										.	.
Alig confidence										.	.									.
Template Conservation																				.
Template Sequence		S	L	W	G	P	S	C	D	E	L	D	Q	I	V	E	S	C	L	.	L	P	E	L	N	V	G	D	W	L	I	F
Template Known Secondary structure						T	T		S	T	T									.						T	T
Template Predicted Secondary structure																				.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions