Phyre 2 alignment of P29012 with c2j66A

Job Description P29012
Confidence 100.00% Date Thu Jan 5 11:45:32 GMT 2012

Rank 24 Aligned Residues 303

% Identity 15% Template c2j66A_

PDB info PDB header:lyase Chain: A: PDB Molecule:btrk; PDBTitle: structural characterisation of btrk decarboxylase from2 butirosin biosynthesis

Resolution 1.65 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																							.																										.	.
Query SS confidence																							.																										.	.
Query Sequence	P	I	Q	A	S	L	D	L	Q	A	L	K	Q	N	L	S	I	V	R	Q	A	A	.	T	H	A	R	V	W	S	V	V	K	A	N	A	Y	G	H	G	I	E	R	I	W	S	A	I	.	.	G	A	T	D	G	F	A	L	L	N	L	E	E	A	I	T	L	R	E	R	G	W	K	G	P	I	L	M	L	E
Query Conservation																							.																										.	.
Alig confidence					.																		.														.	.	.	.									.	.				.
Template Conservation					.																																.	.	.	.														.
Template Sequence	P	F	Y	L	.	Y	D	G	D	F	I	E	A	H	Y	R	Q	L	R	S	R	T	N	P	A	I	Q	F	Y	L	S	L	K	A	N	N	.	.	.	.	N	I	H	L	A	K	L	F	R	Q	W	G	L	.	G	V	E	V	A	S	A	G	E	L	A	L	A	R	H	A	G	F	S	A	E	N	I	I	F	S
Template Known Secondary structure	S				.																T	S		T	T							G	G	G			.	.	.	.											T	T		.					S	S										T	T			G	G	G
Template Predicted Secondary structure					.																																.	.	.	.														.
Template SS confidence
	18	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

	81	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.												130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure				.														.																			.	.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.														.																			.	.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	F	F	.	H	A	Q	D	L	E	I	Y	D	Q	H	R	L	.	T	T	C	V	H	S	N	W	Q	L	K	A	L	Q	N	A	R	L	.	.	K	A	P	L	D	I	Y	L	K	V	N	S	G	M	N	.	.	.	.	.	.	.	.	.	.	.	R	L	G	F	Q	P	D	R	V	L	T	V	W	Q	Q	L
Query Conservation				.														.																			.	.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.														.																			.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	G	P	G	K	K	R	S	E	L	E	I	A	V	Q	S	G	I	Y	C	I	I	A	E	S	V	E	E	L	F	Y	I	E	E	L	A	E	K	E	N	K	T	A	R	V	A	I	R	I	N	P	D	K	S	F	T	A	I	K	M	G	G	V	P	R	Q	F	G	M	D	E	S	M	L	D	A	V	M	D	A	V
Template Known Secondary structure		S														T		S						S															T												S	S						S	S	S					S	S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
	92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

	146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																		.	.	.	.	.	.
Query SS confidence																				.																		.	.	.	.	.	.
Query Sequence	R	A	M	A	N	V	G	E	M	T	L	M	S	H	F	A	E	A	E	.	H	P	D	G	I	S	G	A	M	A	R	I	E	Q	A	A	E	.	.	.	.	.	.	G	L	E	C	R	R	S	L	S	N	S	A	A	T	L	W	H	P	E	A	H	F	D	W	V	R	P	G	I	I	L	Y	G	A	S	P	S
Query Conservation																				.																		.	.	.	.	.	.
Alig confidence																				.																		.	.	.	.	.	.
Template Conservation
Template Sequence	R	S	L	Q	F	T	K	F	I	G	I	H	V	Y	T	G	T	Q	N	L	N	T	D	S	I	I	E	S	M	K	Y	T	V	D	L	G	R	N	I	Y	E	R	Y	G	I	V	C	E	C	I	N	L	G	G	G	F	G	V	P	Y	F	E	K	A	L	D	I	G	K	I	T	R	T	V	S	D	Y	V	Q	E
Template Known Secondary structure				T	T												S		B																													S								B
Template Predicted Secondary structure
Template SS confidence
	174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

	219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	Q	W	R	D	I	A	N	T	G	L	R	P	V	M	T	L	S	S	E	I	I	G	V	Q	T	L	K	A	G	E	R	V	G	Y	G	G	R	Y	T	A	R	D	E	Q	R	I	G	I	V	A	A	G	Y	A	D	G	Y	P	R	H	A	P	T	G	T	P	V	L	V	D	G	V	R	T	M	T	V	G	T
Query Conservation
Alig confidence				.	.	.	.	.	.																																																								.	.	.	.	.
Template Conservation				.	.	.	.	.	.																																																								.	.	.	.	.
Template Sequence	A	R	D	.	.	.	.	.	.	T	R	F	P	Q	T	T	F	I	I	E	S	G	R	Y	L	L	A	Q	A	A	V	Y	V	T	E	V	L	Y	R	K	A	S	K	G	E	V	F	V	I	V	D	G	G	M	H	H	H	A	A	S	P	M	E	Y	.	.	.	.	.	I	P	L	E	K	V	T	I	A	G	P
Template Known Secondary structure			T	.	.	.	.	.	.	T	T		T	T								S					G	G	G														T	T							S			T	T	T		T	T						.	.	.	.	.											S
Template Predicted Secondary structure				.	.	.	.	.	.																																																								.	.	.	.	.
Template SS confidence
	256	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.

	299	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence	V	S	M	.	.	D	M	L	A	V	D	L	T	P	C	P	Q	A	G	I	G	T	P	V	E	L	W	G
Query Conservation				.	.
Alig confidence				.	.									.
Template Conservation														.
Template Sequence	L	C	T	P	E	D	C	L	G	K	D	V	H	.	V	P	A	L	Y	P	G	D	L	V	C	V	L	N
Template Known Secondary structure	S	S	S	T	T									.		S				T	T						S	S
Template Predicted Secondary structure														.
Template SS confidence
	345	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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