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Job DescriptionP29012
Confidence100.00%DateThu Jan 5 11:45:32 GMT 2012
Rank13Aligned Residues333
% Identity31%Templatec2dy3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MTRPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAI. . GATDGFALLNLEEAITLRERGWKGPILM
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Template Sequence  MNLLT. TKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVATLAEAMQLRDIGISQEVLC
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Query Sequence  LEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMS
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Template Sequence  WIWTPEQD. FRAAIDRNIDLAVISPAHAKALIE. TDAEHIRVSIKIDSGLHRSGVDEQEWEGVFSALAAAPHIEVTGMFT
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Query Sequence  HFAEAEHPDGISGAMARIEQAAEGLE. . . CRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTL
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Template Sequence  HLACAPETDRQIIAFRRALALARKHGLECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVAGL. . . . EHGLKPAMTW
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   158.160.........170.........180.........190.........200.........210.........220... ......230...
 
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Query Sequence  SSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCP. QA
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Template Sequence  EAKVSVVKQIR. . . . . . . . . . . . . . . . GFVAVVPAGYADGMPRHAQGKFSVTIDGLDYPQVGRVCMDQFVISLGDNPHGV
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Query Sequence  GIGTPVELWGKE. IKIDDVAAAAGTVGYELMCALALRVPVVTV
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Template Sequence  EAGAKAVIFGENGHDATDFAERLDTINYEVVCRPTGRTVRAYV
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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