Return to main results Retrieve Phyre Job Id

Job DescriptionP63284
Confidence97.96%DateThu Jan 5 12:08:03 GMT 2012
Rank133Aligned Residues156
% Identity10%Templated1yj5a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   594.....600.........610.........620.........630.........640.........650.........660.........670...
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV
Query Conservation     
    

 

 
 


 

 


         



  

           
   
         
          
Alig confidence 


























.....




















...............









..
Template Conservation        



 
 






 
  
  .....      
  
           ...............    
     ..
Template Sequence  LSPNPEVVVAVGFPGAGKSTFIQEHLV. . . . . SAGYVHVNRDTLGSWQRCVSS. . . . . . . . . . . . . . . CQAALRQGKR. .
Template Known Secondary structure  S
SS



TTSSTG.....GGT

S...............TT

..
Template Predicted Secondary structure 










.....



...............


..
Template SS confidence 















































































   360.........370.........380...... ...390.........400....... ..410.......
 
   674.....680.........690.........700.........710.........720. ........730.........740.........
Predicted Secondary structure 



















...




.
Query SS confidence 















































. . .



























.
Query Sequence  ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG. . . SDLIQERFGELDYAHMKELVLGVVSHNF.
Query Conservation 
 



      
   
   
  
   
  
        


 


  ...                            .
Alig confidence 






.












..........
















...



























.
Template Conservation 



 
 .     
      
..........         
 
    
    
   
         
           

Template Sequence  VVIDNTN. PDVPSRARYIQCA. . . . . . . . . . KDAGVPCRCFNFCATIEQARHNNRFREXTDPSHAPVSDXVXFSYRKQFE
Template Known Secondary structure  S

.
S..........T





TT






Template Predicted Secondary structure 


.

..........
















Template SS confidence 















































































   418.420.... .....430....... ..440.........450.........460.........470.........480......
 
   750.........760.........770.........780..
Predicted Secondary structure 







Query SS confidence 
































Query Sequence  RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRL
Query Conservation        
    
 
  
       
    
   
Alig confidence 
































Template Conservation   

  
 
  
  
        
     
   
Template Sequence  PPTLAEGFLEILEIPFRLQEHLDPALQRLYRQF
Template Known Secondary structure 


GGGS
S





TTS
TS
Template Predicted Secondary structure 












Template SS confidence 
































   487..490.........500.........510.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions