Return to main results Retrieve Phyre Job Id

Job DescriptionP63284
Confidence99.80%DateThu Jan 5 12:08:03 GMT 2012
Rank47Aligned Residues215
% Identity22%Templated1ixza_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   547..550.........560.........570.........580.........590.........600.........610.........620......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  PVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD
Query Conservation 
              
   
      
  
   
                
    

 

 
 


 

 


       
Alig confidence 




















...........











































...
Template Conservation    
     

 
 
  
  
 ...........  
            
      


 







 

 


   ... 
Template Sequence  EAPKVTFKDVAGAEEAKEELK. . . . . . . . . . . EIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA. . . R
Template Known Secondary structure 


S

GGG

S
...........
TT



S

TTSST...T
Template Predicted Secondary structure 








...........















...
Template SS confidence 















































































   149150.........160......... 170.........180.........190.........200.........210... .
 
   627..630.........640.........650.........660.........670.........680. ........690.........700.
Predicted Secondary structure 





















.....




Query SS confidence 






















































. . . . .



















Query Sequence  EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEK. . . . . AHPDVFNILLQVLDDGRLTD
Query Conservation    



  

           
   
         
          

 



  .....    
   
   
  
   
Alig confidence 










.....







.....

























.....













......
Template Conservation             .....        .....          
      

  

 
 
                  ......
Template Sequence  VPFITASGSDF. . . . . VEMFVGVG. . . . . AARVRDLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMD. . . . . .
Template Known Secondary structure 

.....S
TT.....TTSSST

......
Template Predicted Secondary structure 








.....
.....








......
Template SS confidence 















































































   215....220..... ....230... ......240.........250.........260.........270........
 
   702.......710.........720.........730.........740.........750.... .....760.........770.........
Predicted Secondary structure 



















..






Query SS confidence 




















































. .
























Query Sequence  GQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI. . NRIDEVVVFHPLGEQHIASIAQIQL
Query Conservation    
        


 


                                   .. 
    
 
  
       
    
Alig confidence  ...















.........................








..
























Template Conservation  ...         

     .........................            
    
    
    
  
    
Template Sequence  . . . GFEKDTAIVVMAATNR. . . . . . . . . . . . . . . . . . . . . . . . . PDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHA
Template Known Secondary structure  ...T

TT

S
.........................GGGS
GGGGSTTSS


S

Template Predicted Secondary structure  ...













.........................












Template SS confidence 















































































   288.290.........300... ......310.........320.........330.........
 
   780.........790.........800.........810.........820.........830.
Predicted Secondary structure 












Query SS confidence 



















































Query Sequence  KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ
Query Conservation                         
         
 
 
   
   
   
  
Alig confidence 





..........










..






















Template Conservation        ..........       

  ..
 
 
  

  
   
   
   
Template Sequence  RGKPLA. . . . . . . . . . EDVDLALLAKR. . TPGFVGADLENLLNEAALLAARE
Template Known Secondary structure  TTS
B
..........TT

T..
TT

T
Template Predicted Secondary structure 





..........



..





Template SS confidence 



















































   340..... ....350...... ...360.........370.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions