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Job DescriptionP63284
Confidence99.66%DateThu Jan 5 12:08:03 GMT 2012
Rank70Aligned Residues192
% Identity21%Templated1iqpa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   568.570.........580.........590.........600.........610.........620.........630.........640.......
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Query Sequence  HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV
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Template Sequence  DDIVGQEHIVKRLKHYVK. . . . . . . . . TGSMPHLLFAGPPGVGKTTAALALAREL. . . FGENWRHNFLELNASDERGINV
Template Known Secondary structure  TT

S
.........T


S
TTSS...GGGTT
T
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   25....30.........40.. .......50.........60.........70 .........80.........90..
 
   648.650.........660.........670.........680.........690.........700.........710.........720.......
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Query Sequence  GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE
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Template Sequence  . . . . . IREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEM. . . . . . . . . . . FSSNVRFILSCNY. . . . . . .
Template Known Secondary structure  .....TS

GGG
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   93......100.........110.........120.........130...... ...140.........
 
   728.730.........740.........750.........760.........770.........780.........790.........800.......
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Query Sequence  RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG
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Template Sequence  . . . . . . . . . . . . . . . . . . SSKIIEPIQSRC. AIFRFRPLRDEDIAKRLRYIAEN. . . . . . . . . EGLELTEEGLQAILYIA
Template Known Secondary structure  ..................GGGS
T.




T.........TT

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   150.........160. ........170.........180.... .....190.........200.
 
   808.810.........820.....
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Query Sequence  YDPVYGARPLKRAIQQQI
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Template Sequence  . . . EGDMRRAINILQAAA
Template Known Secondary structure  ...TT
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   202.......210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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