Return to main results Retrieve Phyre Job Id

Job DescriptionP63284
Confidence99.81%DateThu Jan 5 12:08:03 GMT 2012
Rank41Aligned Residues205
% Identity19%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   561........570.........580.........590.... .....600.........610.........620.........630.........
Predicted Secondary structure 








.
















Query SS confidence 

































.












































Query Sequence  RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP. NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME
Query Conservation   
   
      
  
   
              .  
    

 

 
 


 

 


         



  

   
Alig confidence 

































.



























...













Template Conservation                     
                    



 







 

  

   ...    
 
       
Template Sequence  DYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES. . . NFPFIKICSPDKMI
Template Known Secondary structure 
STTT
TT




S
SS
S
STTSS...T
S
GGG
T
Template Predicted Secondary structure 






















...





Template SS confidence 















































































   506...510.........520.........530.........540.........550.........560........ .570.........580..
 
   640.........650.........660.........670.........680 .........690.........700.........
Predicted Secondary structure 
















..........












Query SS confidence 








































. . . . . . . . . .




























Query Sequence  KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE. . . . . . . . . . KAHPDVFNILLQVLDDGRLTDGQGRTVDF
Query Conservation          
   
         
          

 



 ..........     
   
   
  
   
  
     
Alig confidence 










.........




















..........















........




Template Conservation             .........   
  
      

 




 
                 
      ........     
Template Sequence  GFSETAKCQAM. . . . . . . . . KKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKK. . . . . . . . APPQG
Template Known Secondary structure  T

.........TSS

TT
BTTTTB

TT
........

STT
Template Predicted Secondary structure 



.........










........




Template SS confidence 















































































   583......590... ......600.........610.........620.........630.........640 .....
 
   710.........720.........730.........740.........750.........760.........770.........780.........
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  RNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER
Query Conservation     


 


                                    
    
 
  
       
    
          
Alig confidence 









.................








.......




























........
Template Conservation    



 


.................    
    .......
  

   
  
       
   
     ........
Template Sequence  RKLLIIGTTS. . . . . . . . . . . . . . . . . RKDVLQEME. . . . . . . MLNAFSTTIHVPNIATGEQLLEALELLGN. . . . . . . .
Template Known Secondary structure 
S.................
TT.......
TTTSS


T
........
Template Predicted Secondary structure 



.................


.......












........
Template SS confidence 















































































   646...650..... ....660.... .....670.........680.........690...
 
   790.........800....... ..810.........820..
Predicted Secondary structure 




..






Query SS confidence 

















. .














Query Sequence  GYEIHISDEALKLLSENG. . YDPVYGARPLKRAIQ
Query Conservation               
    ..     
 
 
   
 
Alig confidence  .....












..














Template Conservation  .....        
            

 
    
Template Sequence  . . . . . FKDKERTTIAQQVKGKKVWIGIKKLLMLIE
Template Known Secondary structure  .....S
TTS
Template Predicted Secondary structure  .....









Template SS confidence 


































   694.....700.........710.........720...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions