Job Description P63284 Confidence 99.61% Date Thu Jan 5 12:08:03 GMT 2012 Rank 75 Aligned Residues 254 % Identity 13% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.			570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.						.	.	.	.	.
Predicted Secondary structure																	.	.																																																						.	.	.	.	.
Query SS confidence																	.	.																																																						.	.	.	.	.
Query Sequence		E	R	E	K	L	L	R	M	E	Q	E	L	H	H	R	.	.	V	I	G	Q	N	E	A	V	D	A	V	S	N	A	I	R	R	S	R	A	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	.	.	.	.	.	F	D	S	D	E
Query Conservation																	.	.																																																						.	.	.	.	.
Alig confidence																	.	.																											.	.	.	.	.																							.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		D	I	N	L	E	E	S	I	R	E	S	L	Q	K	R	E	L	L	K	S	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	.	.	.	.	.	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P
Template Known Secondary structure		S																																					T	T					.	.	.	.	.								S																	T	T	T	T	T	S	S
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.						.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.						.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.		.	.	670	.	.	.	.	.	.	.	.	.	680	.	.		.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure																		.	.	.	.	.																									.																.
Query SS confidence																		.	.	.	.	.																									.																.
Query Sequence		A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V	.	.	.	.	.	S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	.	R	R	P	Y	S	V	I	L	L	D	E	V	E	K	A	.	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T
Query Conservation																		.	.	.	.	.																									.																.
Alig confidence																		.	.	.	.	.																									.																.															.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I	W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	.	.	.	.
Template Known Secondary structure										T	T															S																		S		G	G	G	S											S	S	S			T													.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S	N	L	G	S	D	L	I	Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F	R	P	E	F	I	N	R	I	D	E	V	V	V	F	H	P	L	G	E	Q	H	I	A	S	I	A	Q	I	Q	L	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	N	S	K	L	S	I	I	C	V	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	V	T	I	R	E	Q	I	N	I	X	P	S	L	K	A	H	F	.	.	.	.	.	.	.	T	E	I	K	L	N	K	V	D	K	N	E	L	Q	Q	X	I	I	T	R	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									T						T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
									687	.	.	690	.	.	.	.	.	.	.	.														.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.								.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
		781	.	.	.	.																			.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	Y	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	R	G	Y	E	I	H	I	S	D	E	A	L	K	L	L	S	E	N	G	Y	D	P	V	Y	G	A	R	P	L	K	R	A	I	Q	Q	Q	I	E	N	P	L	A	Q	Q	I	L	S	G	E	L	V	P	G	K
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N	K	I	T	Q	L	I	A	K	N	V	A	N	V	S	G	S	T	E	K	A	F	K	I	C	E	A	A	V	E	I	S	K	K	D	F	V	R	K	G	G	L	Q	K	G	K
Template Known Secondary structure													T	T											T	T																										S																							T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.
		843	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		828	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions