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Job DescriptionP63284
Confidence99.81%DateThu Jan 5 12:08:03 GMT 2012
Rank42Aligned Residues186
% Identity21%Templatec3pvsA_
PDB info PDB header:recombinationChain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   568.570......... 580.........590.........600.........610.........620.........630.........640....
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Query Sequence  HRVIGQNEAVDA. . . VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS
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Template Sequence  AQYIGQQHLLAAGKPLPRAIEAGHLH. . . . . . . . . SMILWGPPGTGKTTLAEVIARYA. . . NADVERISAVTSGVKEIRE
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STTSST...T
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   26...30.........40.........50. ........60.........70.... .....80.........90...
 
   645....650.........660.........670.........680.........690.........700.........710.........720....
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Query Sequence  RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL
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Template Sequence  AI. . . . . . . . . . . . . ERARQNRNAGRRTILFVDEVHRF. . . . . . AFLPHIEDGTI. . . . . . . . . . . . TFIGATTENPS. .
Template Known Secondary structure  .............TT

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GG..
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   94. ....100.........110........ .120......... 130.........140
 
   725....730.........740.........750.........760.........770.........780.........790.........800....
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Query Sequence  IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . FELNSALLSRA. RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI. . VLPDETRRAIA
Template Known Secondary structure  ......................GSS
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   147..150....... ..160.........170.........180.........190 .........200.
 
   805....810.........820......
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Query Sequence  ENGYDPVYGARPLKRAIQQQIE
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Template Sequence  ELV. . . NGDARRALNTLEMMAD
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   202.. .....210.........220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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