Job Description P63284 Confidence 96.73% Date Thu Jan 5 12:08:03 GMT 2012 Rank 285 Aligned Residues 201 % Identity 13% Template c3lxwA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 1; PDBTitle: crystal structure of human gtpase imap family member 1 Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620												.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	.	.	.	.	.	.	.	.	.	.	.	F	M	F	D	S	D	E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V	S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	R	R
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		L	I	L	V	G	R	T	G	A	G	K	S	A	T	G	N	S	I	L	G	Q	R	R	F	T	R	A	C	T	T	G	S	R	R	W	D	K	C	H	V	E	V	V	D	T	P	D	I	F	S	S	Q	V	S	K	T	.	.	.	.	.	.	.	D	P	G	C	E	E	R	G	H	C	Y	L	L	S	A	P	G
Template Known Secondary structure						S	S	T	T	S	S										T	S						S									T	T										S		S	S	T	T					.	.	.	.	.	.	.	S	T	T	S											T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	S	V	I	L	L	D	E	V	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S	N	L	G	S	D	L	I	Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F
Query Conservation
Alig confidence																											.	.	.	.	.	.							.											.	.	.
Template Conservation																											.	.	.	.	.	.							.											.	.	.
Template Sequence		P	H	A	L	L	L	V	T	Q	L	G	R	F	T	A	Q	D	Q	Q	A	V	R	Q	V	R	.	.	.	.	.	.	D	M	F	G	E	D	.	V	L	K	W	M	V	I	V	F	T	.	.	.	R	K	E	D	L	A	G	G	S	L	H	D	Y	V	S	N	T	E	N	R	A	L	R	E	L	V	A	E	C
Template Known Secondary structure			S								T	T	B														.	.	.	.	.	.					G	G	.	G	G	G	G							.	.	.		G	G	G	G	T	T																						T
Template Predicted Secondary structure																											.	.	.	.	.	.							.											.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.		.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		R	P	E	F	I	N	R	I	D	E	V	V	V	F	H	P	.	L	G	E	Q	H	I	A	S	I	A	Q	I	Q	L	K	R	L	Y	K	R	L	E	E	R	G	Y	E	I	H	I	S	D	E	A	L	K	L	L	S	E	N	G	Y	D	P	V	Y	G	A	R	P	L	K	R	A	I	Q	Q	Q	I
Query Conservation																		.
Alig confidence				.	.	.	.	.	.	.								.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		G	G	.	.	.	.	.	.	.	R	V	C	A	F	D	N	R	A	T	G	R	E	Q	E	A	Q	V	E	Q	L	L	G	M	V	E	G	L	V	L	E	H	K	G	A	H	Y	S	N	E	V	Y	E	L	A	Q	V	L	R	W	A	G	P	E	E	R	L	R	R	V	A	E	R	V	A	A	R	V
Template Known Secondary structure		T	T	.	.	.	.	.	.	.							T	T																								T	T	T														G	G	G	S
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		182	.								.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions