Job Description P63284 Confidence 96.42% Date Thu Jan 5 12:08:03 GMT 2012 Rank 321 Aligned Residues 115 % Identity 27% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

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		600	.	.	.	.	.	.	.	.	.	610	.	.																																.	.	.	.	.	.	.	620	.	.	.	.	.		.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		S	F	L	F	L	G	P	T	G	V	G	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	C	K	A	L	A	N	F	M	F	D	S	.	D	E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V	S	R	L	V
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		I	M	V	F	V	G	E	T	G	S	G	K	T	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	A	C	T	Q	P	R	R	V	A	A	M	S	V	A	Q	R	V	A	E	E	M	D	V	K	L	G	E	E	V	G	Y	S	I	R	F	E	N	K	T	S	N	K	T	I	L	K	Y
Template Known Secondary structure									T	T	S	S															G	G	G	G	T								S																T	T			B	T	T	T						T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670					.	.	.	.	.	.	.	.	.	680			.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Predicted Secondary structure																									.	.	.	.											.	.
Query SS confidence																									.	.	.	.											.	.
Query Sequence		G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	R	R	P	.	.	.	.	Y	S	V	I	L	L	D	E	V	E	.	.	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R	N	T	V	V	I	M	T	S	N	L	G
Query Conservation																									.	.	.	.											.	.
Alig confidence					.	.	.	.	.	.	.	.	.												.	.	.	.											.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	D	.	.	.	.	.	.	.	.	.	G	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L	M	G	L	L	K	Q	V	.	.	.	.	.	.	.	.	.	.	V	K	R	R	P	D	L	K	I	I	I	M	S	A	T	L	D
Template Known Secondary structure					.	.	.	.	.	.	.	.	.											T	T		T	T									G	G	G																.	.	.	.	.	.	.	.	.	.					T	T								S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.										.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.											.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		722	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	I	Q	E	R	F	G	E	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	K	F	Q	R	Y	F	N	D	A	P
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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