Return to main results Retrieve Phyre Job Id

Job DescriptionP63284
Confidence98.06%DateThu Jan 5 12:08:03 GMT 2012
Rank130Aligned Residues101
% Identity23%Templatec3jvvA_
PDB info PDB header:atp binding proteinChain: A: PDB Molecule:twitching mobility protein; PDBTitle: crystal structure of p. aeruginosa pilt with bound amp-pcp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   596...600.........610.........620.. .......630.........640.........650.........660.........670...
Predicted Secondary structure 






..
























Query SS confidence 


























. .


















































Query Sequence  RPIGSFLFLGPTGVGKTELCKALANFM. . FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV
Query Conservation   
    

 

 
 


 

 


   ..      



  

           
   
         
          
Alig confidence 


























..
















































.
Template Conservation     




 
 








 


  
       








           
 
      
    
  


  

.
Template Sequence  VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPD. I
Template Known Secondary structure 
SS
STTS



SS

S



SSSBTTTBS
TTS

S.
Template Predicted Secondary structure 




































.
Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190........ .
 
   674.....680.........690.........
Predicted Secondary structure 




Query SS confidence 

























Query Sequence  ILLDEVEKAHPDVFNILLQVLDDGRL
Query Conservation 
 



      
   
   
  
  
Alig confidence 






..
















Template Conservation 
 




..
 

   

 

 



Template Sequence  ILVGEMR. . DLETIRLALTAAETGHL
Template Known Secondary structure  S


..STT
Template Predicted Secondary structure 



..




Template SS confidence 

























   200...... ...210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions