Job Description P63284 Confidence 99.88% Date Thu Jan 5 12:08:03 GMT 2012 Rank 24 Aligned Residues 207 % Identity 19% Template c3hu2C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.					590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		H	R	V	I	G	Q	N	E	A	V	D	A	V	S	N	A	I	R	R	S	R	A	.	.	.	.	G	L	A	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	C	K	A	L	A	N	F	M	F	D	S	D	E	A	M	V	R	I	D	M	S	E	F	M	E	K	H	S	V
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																																	.	.	.														.	.	.	.	.
Template Conservation																																																												.	.	.														.	.	.	.	.
Template Sequence		D	D	I	G	G	C	R	K	Q	L	A	Q	I	K	E	M	V	E	L	P	L	R	H	P	A	L	F	K	A	I	G	V	K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	.	.	.	T	G	A	F	F	F	L	I	N	G	P	E	I	.	.	.	.	.	M
Template Known Secondary structure		G	G			S												T														T												S	T	T	S	S												.	.	.		S	S											.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.														.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.						.
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.												.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	L	V	G	A	P	P	G	Y	V	G	Y	E	E	G	G	Y	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	L	D	E	V	E	K	A	H	P	D	.	.	.	.	.	.	.	.	.	.	.	V	F	N	I	L	L	Q	V	L	D	D	G	R	L	T	D	G	Q	G	R	T	V	D	F	R	N	T
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Template Sequence		S	K	L	A	G	E	S	.	.	.	.	.	E	S	N	L	R	K	A	F	E	E	A	E	K	N	A	P	A	I	I	F	I	D	E	L	D	A	I	A	P	K	R	E	K	T	H	G	E	V	E	R	R	I	V	S	Q	L	L	T	L	M	D	G	L	K	.	.	.	.	.	.	.	.	.	Q	R	A	H	V
Template Known Secondary structure		T	S		T	T			.	.	.	.	.														S	S	S							S	G	G	G	T		B		S	S	S																				S		.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure									.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.										.	.	.	340	.
		713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	M	T	S	N	L	G	S	D	L	I	Q	E	R	F	G	E	L	D	Y	A	H	M	K	E	L	V	L	G	V	V	S	H	N	F	R	P	E	F	I	N	R	I	D	E	V	V	V	F	H	P	L	G	E	Q	H	I	A	S	I	A	Q	I	Q	L	K	R	L	Y	K	R	L	E	E	R	G	Y	E
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		I	V	M	A	A	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	N	S	I	D	P	A	L	R	R	F	.	.	.	.	.	.	G	R	F	D	R	E	V	D	I	G	I	P	D	A	T	G	R	L	E	I	L	Q	I	H	T	.	.	.	.	.	.	.	.	.	K	N	M	K
Template Known Secondary structure								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	B		G	G	G	G	S	T	.	.	.	.	.	.	T	S	S																						S	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.																		.	350	.	.	.	.	.	.	.	.	.	360							.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.										.	.	.	.
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	I	S	D	E	A	L	K	L	L	S	E	N	G	Y	D	P	V	Y	G	A	R	P	L	K	R	A	I	Q	Q	Q	I	E	N	P	L	A	Q
Query Conservation
Alig confidence				.												.	.
Template Conservation				.												.	.
Template Sequence		L	A	.	D	D	V	D	L	E	Q	V	A	N	E	.	.	T	H	G	H	V	G	A	D	L	A	A	L	C	S	E	A	A	L	Q	A	I	R	K
Template Known Secondary structure		B		.	T	T										.	.		T	T
Template Predicted Secondary structure				.												.	.
Template SS confidence
		390	.		.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions