Return to main results Retrieve Phyre Job Id

Job DescriptionP63284
Confidence97.59%DateThu Jan 5 12:08:03 GMT 2012
Rank165Aligned Residues93
% Identity23%Templatec3e1sA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:exodeoxyribonuclease v, subunit recd; PDBTitle: structure of an n-terminal truncation of deinococcus radiodurans recd2
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   599600.........610.........620.........630..... ....640.........650.........660........
Predicted Secondary structure 









..........














Query SS confidence 




































. . . . . . . . . .
































Query Sequence  GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS. . . . . . . . . . EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR
Query Conservation     

 

 
 


 

 


         



  
..........
           
   
         
      
Alig confidence 




































..........


























......
Template Conservation      
 
 





  
  
   
      
   
 
  

  
       
 
 
  
               ......
Template Sequence  RLVVLTGGPGTGKSTTTKAVADLAESLGLEVGLCAPTGKAARRLGEVTGRTASTVHRLLGYGPQGFRHNHLEPA. . . . . .
Template Known Secondary structure  S

TTS
TT

SSTS
TTTTS
SSSS

......
Template Predicted Secondary structure 






























......
Template SS confidence 















































































   354.....360.........370.........380.........390.........400.........410.........420.......
 
   669670.........680.........690........
Predicted Secondary structure 








Query SS confidence 





























Query Sequence  RPYSVILLDEVEKAHPDVFNILLQVLDDGR
Query Conservation      

 



      
   
   
  
 
Alig confidence  .




























Template Conservation  .  
 







        

       
Template Sequence  . PYDLLIVDEVSMMGDALMLSLLAAVPPGA
Template Known Secondary structure  .S
S

GGG

TTS
TT
Template Predicted Secondary structure  .













Template SS confidence 





























   428.430.........440.........450......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions